Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Vcpip1Q8CDG3 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Vcpip1Q8CDG3 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vcpip1Q8CDG3 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vcpip1Q8CDG3 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vcpip1Q8CDG3 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.74■□□□□ 0.11
Vcpip1Q8CDG3 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC15.74■□□□□ 0.11
Vcpip1Q8CDG3 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vcpip1Q8CDG3 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vcpip1Q8CDG3 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Vcpip1Q8CDG3 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vcpip1Q8CDG3 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vcpip1Q8CDG3 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vcpip1Q8CDG3 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vcpip1Q8CDG3 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vcpip1Q8CDG3 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vcpip1Q8CDG3 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Vcpip1Q8CDG3 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Vcpip1Q8CDG3 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vcpip1Q8CDG3 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vcpip1Q8CDG3 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vcpip1Q8CDG3 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
Vcpip1Q8CDG3 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
Vcpip1Q8CDG3 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vcpip1Q8CDG3 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vcpip1Q8CDG3 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vcpip1Q8CDG3 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vcpip1Q8CDG3 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.73■□□□□ 0.11
Vcpip1Q8CDG3 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Vcpip1Q8CDG3 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Vcpip1Q8CDG3 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vcpip1Q8CDG3 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.73■□□□□ 0.11
Vcpip1Q8CDG3 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.73■□□□□ 0.11
Vcpip1Q8CDG3 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.73■□□□□ 0.11
Vcpip1Q8CDG3 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Vcpip1Q8CDG3 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vcpip1Q8CDG3 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vcpip1Q8CDG3 Gm15590-201ENSMUST00000078419 552 ntBASIC15.73■□□□□ 0.11
Vcpip1Q8CDG3 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vcpip1Q8CDG3 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Vcpip1Q8CDG3 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Vcpip1Q8CDG3 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vcpip1Q8CDG3 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vcpip1Q8CDG3 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Vcpip1Q8CDG3 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vcpip1Q8CDG3 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vcpip1Q8CDG3 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC15.72■□□□□ 0.11
Vcpip1Q8CDG3 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vcpip1Q8CDG3 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vcpip1Q8CDG3 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vcpip1Q8CDG3 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vcpip1Q8CDG3 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vcpip1Q8CDG3 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.72■□□□□ 0.11
Vcpip1Q8CDG3 Gm12260-201ENSMUST00000122447 411 ntBASIC15.72■□□□□ 0.11
Vcpip1Q8CDG3 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.72■□□□□ 0.11
Vcpip1Q8CDG3 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vcpip1Q8CDG3 Gm27628-201ENSMUST00000184911 107 ntBASIC15.72■□□□□ 0.11
Vcpip1Q8CDG3 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.72■□□□□ 0.11
Vcpip1Q8CDG3 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.72■□□□□ 0.11
Vcpip1Q8CDG3 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.72■□□□□ 0.11
Vcpip1Q8CDG3 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.72■□□□□ 0.11
Vcpip1Q8CDG3 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vcpip1Q8CDG3 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.72■□□□□ 0.11
Vcpip1Q8CDG3 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Vcpip1Q8CDG3 Gm28182-201ENSMUST00000188354 2477 ntBASIC15.72■□□□□ 0.11
Vcpip1Q8CDG3 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Vcpip1Q8CDG3 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Vcpip1Q8CDG3 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vcpip1Q8CDG3 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vcpip1Q8CDG3 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vcpip1Q8CDG3 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vcpip1Q8CDG3 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
Vcpip1Q8CDG3 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.71■□□□□ 0.11
Vcpip1Q8CDG3 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vcpip1Q8CDG3 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vcpip1Q8CDG3 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.71■□□□□ 0.11
Vcpip1Q8CDG3 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Vcpip1Q8CDG3 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vcpip1Q8CDG3 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Vcpip1Q8CDG3 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vcpip1Q8CDG3 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vcpip1Q8CDG3 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.71■□□□□ 0.11
Vcpip1Q8CDG3 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.71■□□□□ 0.11
Vcpip1Q8CDG3 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vcpip1Q8CDG3 Gm27300-201ENSMUST00000184085 97 ntBASIC15.71■□□□□ 0.11
Vcpip1Q8CDG3 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.71■□□□□ 0.11
Vcpip1Q8CDG3 Gm27335-201ENSMUST00000184758 97 ntBASIC15.71■□□□□ 0.11
Vcpip1Q8CDG3 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.71■□□□□ 0.11
Vcpip1Q8CDG3 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vcpip1Q8CDG3 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Vcpip1Q8CDG3 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Vcpip1Q8CDG3 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vcpip1Q8CDG3 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vcpip1Q8CDG3 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vcpip1Q8CDG3 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vcpip1Q8CDG3 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vcpip1Q8CDG3 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vcpip1Q8CDG3 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vcpip1Q8CDG3 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Vcpip1Q8CDG3 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms