Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3rf3Q8C120 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3rf3Q8C120 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3rf3Q8C120 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Sh3rf3Q8C120 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3rf3Q8C120 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3rf3Q8C120 Gm15467-201ENSMUST00000120582 445 ntBASIC15.26■□□□□ 0.03
Sh3rf3Q8C120 Mir3113-201ENSMUST00000175478 76 ntBASIC15.26■□□□□ 0.03
Sh3rf3Q8C120 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3rf3Q8C120 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3rf3Q8C120 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Sh3rf3Q8C120 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Sh3rf3Q8C120 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3rf3Q8C120 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.26■□□□□ 0.03
Sh3rf3Q8C120 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3rf3Q8C120 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3rf3Q8C120 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3rf3Q8C120 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3rf3Q8C120 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Sh3rf3Q8C120 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3rf3Q8C120 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3rf3Q8C120 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3rf3Q8C120 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh3rf3Q8C120 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Sh3rf3Q8C120 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh3rf3Q8C120 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Sh3rf3Q8C120 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh3rf3Q8C120 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sh3rf3Q8C120 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh3rf3Q8C120 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.25■□□□□ 0.03
Sh3rf3Q8C120 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh3rf3Q8C120 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC15.25■□□□□ 0.03
Sh3rf3Q8C120 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh3rf3Q8C120 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.25■□□□□ 0.03
Sh3rf3Q8C120 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC15.25■□□□□ 0.03
Sh3rf3Q8C120 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sh3rf3Q8C120 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh3rf3Q8C120 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.25■□□□□ 0.03
Sh3rf3Q8C120 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Sh3rf3Q8C120 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.25■□□□□ 0.03
Sh3rf3Q8C120 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sh3rf3Q8C120 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh3rf3Q8C120 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh3rf3Q8C120 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh3rf3Q8C120 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh3rf3Q8C120 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh3rf3Q8C120 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Sh3rf3Q8C120 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sh3rf3Q8C120 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh3rf3Q8C120 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh3rf3Q8C120 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh3rf3Q8C120 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.25■□□□□ 0.03
Sh3rf3Q8C120 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh3rf3Q8C120 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Sh3rf3Q8C120 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh3rf3Q8C120 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh3rf3Q8C120 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh3rf3Q8C120 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh3rf3Q8C120 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sh3rf3Q8C120 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.24■□□□□ 0.03
Sh3rf3Q8C120 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh3rf3Q8C120 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sh3rf3Q8C120 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh3rf3Q8C120 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Sh3rf3Q8C120 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh3rf3Q8C120 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.24■□□□□ 0.03
Sh3rf3Q8C120 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh3rf3Q8C120 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC15.24■□□□□ 0.03
Sh3rf3Q8C120 Gm13464-201ENSMUST00000119418 935 ntBASIC15.24■□□□□ 0.03
Sh3rf3Q8C120 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.24■□□□□ 0.03
Sh3rf3Q8C120 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.24■□□□□ 0.03
Sh3rf3Q8C120 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC15.24■□□□□ 0.03
Sh3rf3Q8C120 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.24■□□□□ 0.03
Sh3rf3Q8C120 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh3rf3Q8C120 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh3rf3Q8C120 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Sh3rf3Q8C120 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh3rf3Q8C120 Gm10175-201ENSMUST00000086013 645 ntBASIC15.24■□□□□ 0.03
Sh3rf3Q8C120 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh3rf3Q8C120 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh3rf3Q8C120 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh3rf3Q8C120 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Sh3rf3Q8C120 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh3rf3Q8C120 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sh3rf3Q8C120 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh3rf3Q8C120 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh3rf3Q8C120 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.24■□□□□ 0.03
Sh3rf3Q8C120 Gm21451-201ENSMUST00000111062 2775 ntBASIC15.24■□□□□ 0.03
Sh3rf3Q8C120 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh3rf3Q8C120 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Sh3rf3Q8C120 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.23■□□□□ 0.03
Sh3rf3Q8C120 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh3rf3Q8C120 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh3rf3Q8C120 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh3rf3Q8C120 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh3rf3Q8C120 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC15.23■□□□□ 0.03
Sh3rf3Q8C120 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh3rf3Q8C120 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh3rf3Q8C120 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh3rf3Q8C120 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms