Protein–RNA interactions for Protein: Q8BUN5

Smad3, Mothers against decapentaplegic homolog 3, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad3Q8BUN5 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smad3Q8BUN5 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smad3Q8BUN5 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.48■□□□□ 0.07
Smad3Q8BUN5 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
Smad3Q8BUN5 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smad3Q8BUN5 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smad3Q8BUN5 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smad3Q8BUN5 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smad3Q8BUN5 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smad3Q8BUN5 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smad3Q8BUN5 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smad3Q8BUN5 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Smad3Q8BUN5 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smad3Q8BUN5 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Smad3Q8BUN5 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Smad3Q8BUN5 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.47■□□□□ 0.07
Smad3Q8BUN5 Mir1894-201ENSMUST00000122802 81 ntBASIC15.47■□□□□ 0.07
Smad3Q8BUN5 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC15.47■□□□□ 0.07
Smad3Q8BUN5 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC15.47■□□□□ 0.07
Smad3Q8BUN5 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
Smad3Q8BUN5 Gm6244-201ENSMUST00000178732 841 ntBASIC15.47■□□□□ 0.07
Smad3Q8BUN5 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Smad3Q8BUN5 Gm43179-201ENSMUST00000198797 275 ntBASIC15.47■□□□□ 0.07
Smad3Q8BUN5 Gm9728-201ENSMUST00000200197 1055 ntBASIC15.47■□□□□ 0.07
Smad3Q8BUN5 Gm44974-201ENSMUST00000206387 1279 ntBASIC15.47■□□□□ 0.07
Smad3Q8BUN5 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Smad3Q8BUN5 AC149588.3-201ENSMUST00000227515 150 ntBASIC15.47■□□□□ 0.07
Smad3Q8BUN5 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smad3Q8BUN5 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Smad3Q8BUN5 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Smad3Q8BUN5 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smad3Q8BUN5 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Smad3Q8BUN5 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.47■□□□□ 0.07
Smad3Q8BUN5 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Smad3Q8BUN5 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smad3Q8BUN5 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smad3Q8BUN5 Gm42853-201ENSMUST00000201273 1387 ntBASIC15.47■□□□□ 0.07
Smad3Q8BUN5 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Smad3Q8BUN5 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smad3Q8BUN5 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smad3Q8BUN5 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smad3Q8BUN5 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smad3Q8BUN5 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.46■□□□□ 0.07
Smad3Q8BUN5 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smad3Q8BUN5 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smad3Q8BUN5 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Smad3Q8BUN5 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC15.46■□□□□ 0.07
Smad3Q8BUN5 Mir7654-201ENSMUST00000185082 70 ntBASIC15.46■□□□□ 0.07
Smad3Q8BUN5 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC15.46■□□□□ 0.07
Smad3Q8BUN5 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smad3Q8BUN5 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.46■□□□□ 0.07
Smad3Q8BUN5 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smad3Q8BUN5 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smad3Q8BUN5 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Smad3Q8BUN5 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Smad3Q8BUN5 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smad3Q8BUN5 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smad3Q8BUN5 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.06
Smad3Q8BUN5 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Smad3Q8BUN5 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Smad3Q8BUN5 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Smad3Q8BUN5 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Smad3Q8BUN5 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.46■□□□□ 0.06
Smad3Q8BUN5 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Smad3Q8BUN5 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Smad3Q8BUN5 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smad3Q8BUN5 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smad3Q8BUN5 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smad3Q8BUN5 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.45■□□□□ 0.06
Smad3Q8BUN5 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smad3Q8BUN5 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.45■□□□□ 0.06
Smad3Q8BUN5 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smad3Q8BUN5 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smad3Q8BUN5 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Smad3Q8BUN5 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Smad3Q8BUN5 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Smad3Q8BUN5 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Smad3Q8BUN5 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC15.45■□□□□ 0.06
Smad3Q8BUN5 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smad3Q8BUN5 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smad3Q8BUN5 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.45■□□□□ 0.06
Smad3Q8BUN5 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC15.45■□□□□ 0.06
Smad3Q8BUN5 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smad3Q8BUN5 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Smad3Q8BUN5 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Smad3Q8BUN5 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smad3Q8BUN5 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC15.44■□□□□ 0.06
Smad3Q8BUN5 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smad3Q8BUN5 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smad3Q8BUN5 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
Smad3Q8BUN5 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Smad3Q8BUN5 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Smad3Q8BUN5 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smad3Q8BUN5 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.44■□□□□ 0.06
Smad3Q8BUN5 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smad3Q8BUN5 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Smad3Q8BUN5 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Smad3Q8BUN5 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.44■□□□□ 0.06
Smad3Q8BUN5 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Smad3Q8BUN5 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms