Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Usp54Q8BL06 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Usp54Q8BL06 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Usp54Q8BL06 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Usp54Q8BL06 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Usp54Q8BL06 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
Usp54Q8BL06 Gm43548-201ENSMUST00000197139 2353 ntBASIC20.48■□□□□ 0.87
Usp54Q8BL06 Gm42471-201ENSMUST00000201457 1865 ntBASIC20.48■□□□□ 0.87
Usp54Q8BL06 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Usp54Q8BL06 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp54Q8BL06 Carlr-201ENSMUST00000181515 2574 ntBASIC20.47■□□□□ 0.87
Usp54Q8BL06 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp54Q8BL06 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
Usp54Q8BL06 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Usp54Q8BL06 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC20.47■□□□□ 0.87
Usp54Q8BL06 Gm6983-201ENSMUST00000214912 628 ntBASIC20.47■□□□□ 0.87
Usp54Q8BL06 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp54Q8BL06 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Usp54Q8BL06 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Usp54Q8BL06 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp54Q8BL06 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Usp54Q8BL06 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Usp54Q8BL06 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp54Q8BL06 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Usp54Q8BL06 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp54Q8BL06 Gm14451-201ENSMUST00000121581 1542 ntBASIC20.47■□□□□ 0.87
Usp54Q8BL06 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp54Q8BL06 Ssr1-204ENSMUST00000225319 1610 ntBASIC20.47■□□□□ 0.87
Usp54Q8BL06 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC20.46■□□□□ 0.87
Usp54Q8BL06 Gm37424-201ENSMUST00000191727 561 ntBASIC20.46■□□□□ 0.87
Usp54Q8BL06 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC20.46■□□□□ 0.87
Usp54Q8BL06 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp54Q8BL06 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp54Q8BL06 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Usp54Q8BL06 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp54Q8BL06 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp54Q8BL06 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Usp54Q8BL06 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp54Q8BL06 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC20.46■□□□□ 0.87
Usp54Q8BL06 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC20.46■□□□□ 0.87
Usp54Q8BL06 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC20.46■□□□□ 0.87
Usp54Q8BL06 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp54Q8BL06 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp54Q8BL06 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp54Q8BL06 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Usp54Q8BL06 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Usp54Q8BL06 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp54Q8BL06 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp54Q8BL06 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp54Q8BL06 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp54Q8BL06 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp54Q8BL06 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp54Q8BL06 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC20.45■□□□□ 0.86
Usp54Q8BL06 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp54Q8BL06 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Usp54Q8BL06 Gm37812-201ENSMUST00000195216 2475 ntBASIC20.45■□□□□ 0.86
Usp54Q8BL06 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp54Q8BL06 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Usp54Q8BL06 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp54Q8BL06 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp54Q8BL06 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC20.45■□□□□ 0.86
Usp54Q8BL06 Gm12928-201ENSMUST00000117115 573 ntBASIC20.45■□□□□ 0.86
Usp54Q8BL06 Gm11814-201ENSMUST00000119515 929 ntBASIC20.45■□□□□ 0.86
Usp54Q8BL06 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Usp54Q8BL06 Gm29127-201ENSMUST00000188304 517 ntBASIC20.45■□□□□ 0.86
Usp54Q8BL06 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Usp54Q8BL06 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC20.45■□□□□ 0.86
Usp54Q8BL06 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Usp54Q8BL06 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Usp54Q8BL06 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Usp54Q8BL06 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.86
Usp54Q8BL06 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp54Q8BL06 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp54Q8BL06 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp54Q8BL06 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC20.44■□□□□ 0.86
Usp54Q8BL06 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC20.44■□□□□ 0.86
Usp54Q8BL06 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC20.44■□□□□ 0.86
Usp54Q8BL06 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC20.44■□□□□ 0.86
Usp54Q8BL06 Gm5276-201ENSMUST00000196683 1047 ntBASIC20.44■□□□□ 0.86
Usp54Q8BL06 Gm7561-201ENSMUST00000211203 886 ntBASIC20.44■□□□□ 0.86
Usp54Q8BL06 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp54Q8BL06 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp54Q8BL06 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp54Q8BL06 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Usp54Q8BL06 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp54Q8BL06 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC20.44■□□□□ 0.86
Usp54Q8BL06 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Usp54Q8BL06 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC20.44■□□□□ 0.86
Usp54Q8BL06 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp54Q8BL06 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp54Q8BL06 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp54Q8BL06 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Usp54Q8BL06 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC20.44■□□□□ 0.86
Usp54Q8BL06 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC20.43■□□□□ 0.86
Usp54Q8BL06 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp54Q8BL06 AC168058.1-201ENSMUST00000219521 2282 ntBASIC20.43■□□□□ 0.86
Usp54Q8BL06 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp54Q8BL06 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp54Q8BL06 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp54Q8BL06 AC161252.3-201ENSMUST00000225465 1549 ntBASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms