Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SynbQ8BI41 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SynbQ8BI41 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SynbQ8BI41 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SynbQ8BI41 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SynbQ8BI41 Gm14722-201ENSMUST00000118943 689 ntBASIC14.03□□□□□ -0.16
SynbQ8BI41 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SynbQ8BI41 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.03□□□□□ -0.16
SynbQ8BI41 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SynbQ8BI41 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SynbQ8BI41 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.03□□□□□ -0.16
SynbQ8BI41 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SynbQ8BI41 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.03□□□□□ -0.16
SynbQ8BI41 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SynbQ8BI41 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
SynbQ8BI41 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SynbQ8BI41 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SynbQ8BI41 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.03□□□□□ -0.16
SynbQ8BI41 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SynbQ8BI41 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
SynbQ8BI41 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SynbQ8BI41 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SynbQ8BI41 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SynbQ8BI41 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SynbQ8BI41 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SynbQ8BI41 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SynbQ8BI41 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SynbQ8BI41 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SynbQ8BI41 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SynbQ8BI41 Grk6-207ENSMUST00000225925 2769 ntBASIC14.02□□□□□ -0.16
SynbQ8BI41 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SynbQ8BI41 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.02□□□□□ -0.16
SynbQ8BI41 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SynbQ8BI41 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SynbQ8BI41 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SynbQ8BI41 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SynbQ8BI41 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SynbQ8BI41 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SynbQ8BI41 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SynbQ8BI41 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
SynbQ8BI41 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SynbQ8BI41 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SynbQ8BI41 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SynbQ8BI41 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SynbQ8BI41 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SynbQ8BI41 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.02□□□□□ -0.17
SynbQ8BI41 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SynbQ8BI41 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SynbQ8BI41 Gm27622-201ENSMUST00000183779 60 ntBASIC14.02□□□□□ -0.17
SynbQ8BI41 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.02□□□□□ -0.17
SynbQ8BI41 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.02□□□□□ -0.17
SynbQ8BI41 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.02□□□□□ -0.17
SynbQ8BI41 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SynbQ8BI41 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
SynbQ8BI41 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SynbQ8BI41 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SynbQ8BI41 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SynbQ8BI41 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SynbQ8BI41 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.02□□□□□ -0.17
SynbQ8BI41 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
SynbQ8BI41 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
SynbQ8BI41 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SynbQ8BI41 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SynbQ8BI41 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
SynbQ8BI41 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SynbQ8BI41 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SynbQ8BI41 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SynbQ8BI41 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SynbQ8BI41 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SynbQ8BI41 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SynbQ8BI41 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.01□□□□□ -0.17
SynbQ8BI41 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.01□□□□□ -0.17
SynbQ8BI41 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.01□□□□□ -0.17
SynbQ8BI41 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SynbQ8BI41 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SynbQ8BI41 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SynbQ8BI41 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SynbQ8BI41 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SynbQ8BI41 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.01□□□□□ -0.17
SynbQ8BI41 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SynbQ8BI41 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SynbQ8BI41 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SynbQ8BI41 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SynbQ8BI41 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.01□□□□□ -0.17
SynbQ8BI41 Gm10154-201ENSMUST00000084445 354 ntBASIC14.01□□□□□ -0.17
SynbQ8BI41 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SynbQ8BI41 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SynbQ8BI41 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SynbQ8BI41 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SynbQ8BI41 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SynbQ8BI41 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SynbQ8BI41 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SynbQ8BI41 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SynbQ8BI41 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SynbQ8BI41 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SynbQ8BI41 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SynbQ8BI41 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SynbQ8BI41 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SynbQ8BI41 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
SynbQ8BI41 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms