Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf38Q8BI21 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rnf38Q8BI21 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.15□□□□□ -0.14
Rnf38Q8BI21 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf38Q8BI21 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf38Q8BI21 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.15
Rnf38Q8BI21 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf38Q8BI21 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.14□□□□□ -0.15
Rnf38Q8BI21 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.14□□□□□ -0.15
Rnf38Q8BI21 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf38Q8BI21 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.14□□□□□ -0.15
Rnf38Q8BI21 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf38Q8BI21 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.14□□□□□ -0.15
Rnf38Q8BI21 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Rnf38Q8BI21 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf38Q8BI21 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf38Q8BI21 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf38Q8BI21 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.14□□□□□ -0.15
Rnf38Q8BI21 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.14□□□□□ -0.15
Rnf38Q8BI21 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf38Q8BI21 Gm7230-201ENSMUST00000173026 815 ntBASIC14.14□□□□□ -0.15
Rnf38Q8BI21 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf38Q8BI21 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf38Q8BI21 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Rnf38Q8BI21 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf38Q8BI21 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf38Q8BI21 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf38Q8BI21 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf38Q8BI21 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf38Q8BI21 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf38Q8BI21 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf38Q8BI21 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.14□□□□□ -0.15
Rnf38Q8BI21 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Rnf38Q8BI21 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.14□□□□□ -0.15
Rnf38Q8BI21 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf38Q8BI21 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf38Q8BI21 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf38Q8BI21 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf38Q8BI21 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf38Q8BI21 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf38Q8BI21 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf38Q8BI21 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf38Q8BI21 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf38Q8BI21 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf38Q8BI21 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf38Q8BI21 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf38Q8BI21 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf38Q8BI21 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf38Q8BI21 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rnf38Q8BI21 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.13□□□□□ -0.15
Rnf38Q8BI21 Gm15173-201ENSMUST00000122049 433 ntBASIC14.13□□□□□ -0.15
Rnf38Q8BI21 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf38Q8BI21 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf38Q8BI21 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Rnf38Q8BI21 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Rnf38Q8BI21 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf38Q8BI21 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.13□□□□□ -0.15
Rnf38Q8BI21 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf38Q8BI21 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.13□□□□□ -0.15
Rnf38Q8BI21 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf38Q8BI21 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf38Q8BI21 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf38Q8BI21 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf38Q8BI21 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Rnf38Q8BI21 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.13□□□□□ -0.15
Rnf38Q8BI21 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.13□□□□□ -0.15
Rnf38Q8BI21 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf38Q8BI21 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf38Q8BI21 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf38Q8BI21 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.12□□□□□ -0.15
Rnf38Q8BI21 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf38Q8BI21 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf38Q8BI21 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Rnf38Q8BI21 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf38Q8BI21 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf38Q8BI21 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf38Q8BI21 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf38Q8BI21 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf38Q8BI21 Gm18195-201ENSMUST00000207604 706 ntBASIC14.12□□□□□ -0.15
Rnf38Q8BI21 Gm10060-201ENSMUST00000212002 111 ntBASIC14.12□□□□□ -0.15
Rnf38Q8BI21 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf38Q8BI21 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf38Q8BI21 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.12□□□□□ -0.15
Rnf38Q8BI21 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf38Q8BI21 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf38Q8BI21 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.12□□□□□ -0.15
Rnf38Q8BI21 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf38Q8BI21 Matn2-206ENSMUST00000228570 2798 ntBASIC14.12□□□□□ -0.15
Rnf38Q8BI21 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.12□□□□□ -0.15
Rnf38Q8BI21 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf38Q8BI21 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Rnf38Q8BI21 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf38Q8BI21 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf38Q8BI21 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf38Q8BI21 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf38Q8BI21 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf38Q8BI21 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf38Q8BI21 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf38Q8BI21 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf38Q8BI21 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms