Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Atg4dQ8BGV9 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.64□□□□□ -0.23
Atg4dQ8BGV9 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Atg4dQ8BGV9 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Atg4dQ8BGV9 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Atg4dQ8BGV9 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Atg4dQ8BGV9 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Atg4dQ8BGV9 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Atg4dQ8BGV9 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Atg4dQ8BGV9 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atg4dQ8BGV9 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atg4dQ8BGV9 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Atg4dQ8BGV9 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Atg4dQ8BGV9 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Atg4dQ8BGV9 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.63□□□□□ -0.23
Atg4dQ8BGV9 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Atg4dQ8BGV9 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atg4dQ8BGV9 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atg4dQ8BGV9 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atg4dQ8BGV9 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atg4dQ8BGV9 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Atg4dQ8BGV9 Gm10275-202ENSMUST00000168697 495 ntBASIC13.63□□□□□ -0.23
Atg4dQ8BGV9 Gm24158-201ENSMUST00000175263 71 ntBASIC13.63□□□□□ -0.23
Atg4dQ8BGV9 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atg4dQ8BGV9 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atg4dQ8BGV9 Gm10275-201ENSMUST00000092620 635 ntBASIC13.63□□□□□ -0.23
Atg4dQ8BGV9 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Atg4dQ8BGV9 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atg4dQ8BGV9 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atg4dQ8BGV9 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.63□□□□□ -0.23
Atg4dQ8BGV9 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atg4dQ8BGV9 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Atg4dQ8BGV9 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atg4dQ8BGV9 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Atg4dQ8BGV9 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atg4dQ8BGV9 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Atg4dQ8BGV9 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atg4dQ8BGV9 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.63□□□□□ -0.23
Atg4dQ8BGV9 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atg4dQ8BGV9 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atg4dQ8BGV9 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atg4dQ8BGV9 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atg4dQ8BGV9 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atg4dQ8BGV9 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atg4dQ8BGV9 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Atg4dQ8BGV9 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atg4dQ8BGV9 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Atg4dQ8BGV9 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atg4dQ8BGV9 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Atg4dQ8BGV9 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atg4dQ8BGV9 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atg4dQ8BGV9 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.62□□□□□ -0.23
Atg4dQ8BGV9 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.62□□□□□ -0.23
Atg4dQ8BGV9 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atg4dQ8BGV9 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Atg4dQ8BGV9 Mir449b-201ENSMUST00000104833 80 ntBASIC13.62□□□□□ -0.23
Atg4dQ8BGV9 Gm14701-201ENSMUST00000117156 348 ntBASIC13.62□□□□□ -0.23
Atg4dQ8BGV9 Gm10253-201ENSMUST00000194270 940 ntBASIC13.62□□□□□ -0.23
Atg4dQ8BGV9 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.62□□□□□ -0.23
Atg4dQ8BGV9 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.62□□□□□ -0.23
Atg4dQ8BGV9 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.62□□□□□ -0.23
Atg4dQ8BGV9 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Atg4dQ8BGV9 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atg4dQ8BGV9 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atg4dQ8BGV9 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.62□□□□□ -0.23
Atg4dQ8BGV9 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Atg4dQ8BGV9 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.62□□□□□ -0.23
Atg4dQ8BGV9 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Atg4dQ8BGV9 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.62□□□□□ -0.23
Atg4dQ8BGV9 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atg4dQ8BGV9 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atg4dQ8BGV9 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.62□□□□□ -0.23
Atg4dQ8BGV9 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atg4dQ8BGV9 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atg4dQ8BGV9 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atg4dQ8BGV9 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atg4dQ8BGV9 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atg4dQ8BGV9 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Atg4dQ8BGV9 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atg4dQ8BGV9 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atg4dQ8BGV9 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Atg4dQ8BGV9 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atg4dQ8BGV9 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atg4dQ8BGV9 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atg4dQ8BGV9 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Atg4dQ8BGV9 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atg4dQ8BGV9 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atg4dQ8BGV9 Gm12134-201ENSMUST00000122109 520 ntBASIC13.61□□□□□ -0.23
Atg4dQ8BGV9 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Atg4dQ8BGV9 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atg4dQ8BGV9 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.61□□□□□ -0.23
Atg4dQ8BGV9 Gm29541-201ENSMUST00000191351 678 ntBASIC13.61□□□□□ -0.23
Atg4dQ8BGV9 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Atg4dQ8BGV9 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atg4dQ8BGV9 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Atg4dQ8BGV9 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atg4dQ8BGV9 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atg4dQ8BGV9 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Atg4dQ8BGV9 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atg4dQ8BGV9 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms