Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.15■□□□□ 0.02
Trim62Q80V85 Ksr1-207ENSMUST00000226282 5260 ntBASIC15.15■□□□□ 0.02
Trim62Q80V85 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim62Q80V85 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim62Q80V85 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim62Q80V85 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.14■□□□□ 0.01
Trim62Q80V85 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim62Q80V85 Gm6756-201ENSMUST00000180647 1620 ntBASIC15.14■□□□□ 0.01
Trim62Q80V85 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trim62Q80V85 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.14■□□□□ 0.01
Trim62Q80V85 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim62Q80V85 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim62Q80V85 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trim62Q80V85 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.14■□□□□ 0.01
Trim62Q80V85 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim62Q80V85 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim62Q80V85 Gm8116-201ENSMUST00000182917 1201 ntBASIC15.14■□□□□ 0.01
Trim62Q80V85 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC15.14■□□□□ 0.01
Trim62Q80V85 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim62Q80V85 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim62Q80V85 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim62Q80V85 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim62Q80V85 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim62Q80V85 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim62Q80V85 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim62Q80V85 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim62Q80V85 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.14■□□□□ 0.01
Trim62Q80V85 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim62Q80V85 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim62Q80V85 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trim62Q80V85 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim62Q80V85 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim62Q80V85 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim62Q80V85 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trim62Q80V85 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC15.13■□□□□ 0.01
Trim62Q80V85 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15.13■□□□□ 0.01
Trim62Q80V85 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim62Q80V85 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim62Q80V85 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC15.13■□□□□ 0.01
Trim62Q80V85 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.13■□□□□ 0.01
Trim62Q80V85 Gm37230-201ENSMUST00000194491 818 ntBASIC15.13■□□□□ 0.01
Trim62Q80V85 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC15.13■□□□□ 0.01
Trim62Q80V85 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim62Q80V85 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim62Q80V85 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim62Q80V85 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim62Q80V85 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim62Q80V85 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Trim62Q80V85 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim62Q80V85 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trim62Q80V85 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim62Q80V85 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim62Q80V85 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim62Q80V85 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim62Q80V85 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim62Q80V85 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim62Q80V85 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Trim62Q80V85 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim62Q80V85 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trim62Q80V85 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim62Q80V85 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim62Q80V85 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim62Q80V85 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim62Q80V85 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim62Q80V85 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim62Q80V85 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.12■□□□□ 0.01
Trim62Q80V85 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim62Q80V85 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15.12■□□□□ 0.01
Trim62Q80V85 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Trim62Q80V85 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.12■□□□□ 0.01
Trim62Q80V85 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Trim62Q80V85 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Trim62Q80V85 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.12■□□□□ 0.01
Trim62Q80V85 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim62Q80V85 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim62Q80V85 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trim62Q80V85 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trim62Q80V85 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim62Q80V85 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim62Q80V85 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim62Q80V85 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim62Q80V85 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim62Q80V85 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trim62Q80V85 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC15.12■□□□□ 0.01
Trim62Q80V85 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.12■□□□□ 0.01
Trim62Q80V85 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim62Q80V85 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim62Q80V85 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim62Q80V85 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim62Q80V85 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim62Q80V85 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim62Q80V85 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Trim62Q80V85 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
Trim62Q80V85 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Trim62Q80V85 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trim62Q80V85 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim62Q80V85 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim62Q80V85 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
Trim62Q80V85 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim62Q80V85 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms