Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Npc1l1Q6T3U4 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.5■□□□□ 0.39
Npc1l1Q6T3U4 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Npc1l1Q6T3U4 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC17.49■□□□□ 0.39
Npc1l1Q6T3U4 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Npc1l1Q6T3U4 Gm15487-201ENSMUST00000122373 465 ntBASIC17.49■□□□□ 0.39
Npc1l1Q6T3U4 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Npc1l1Q6T3U4 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Npc1l1Q6T3U4 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Npc1l1Q6T3U4 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Npc1l1Q6T3U4 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Npc1l1Q6T3U4 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Npc1l1Q6T3U4 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Npc1l1Q6T3U4 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Npc1l1Q6T3U4 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Npc1l1Q6T3U4 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Npc1l1Q6T3U4 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
Npc1l1Q6T3U4 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Npc1l1Q6T3U4 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Npc1l1Q6T3U4 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
Npc1l1Q6T3U4 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Npc1l1Q6T3U4 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Npc1l1Q6T3U4 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Npc1l1Q6T3U4 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Npc1l1Q6T3U4 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Npc1l1Q6T3U4 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC17.49■□□□□ 0.39
Npc1l1Q6T3U4 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Npc1l1Q6T3U4 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Npc1l1Q6T3U4 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Npc1l1Q6T3U4 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Npc1l1Q6T3U4 Gm5566-201ENSMUST00000116118 459 ntBASIC17.48■□□□□ 0.39
Npc1l1Q6T3U4 Gm14767-201ENSMUST00000121559 586 ntBASIC17.48■□□□□ 0.39
Npc1l1Q6T3U4 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC17.48■□□□□ 0.39
Npc1l1Q6T3U4 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC17.48■□□□□ 0.39
Npc1l1Q6T3U4 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Npc1l1Q6T3U4 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Npc1l1Q6T3U4 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Npc1l1Q6T3U4 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Npc1l1Q6T3U4 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Npc1l1Q6T3U4 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Npc1l1Q6T3U4 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.48■□□□□ 0.39
Npc1l1Q6T3U4 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Npc1l1Q6T3U4 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
Npc1l1Q6T3U4 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Npc1l1Q6T3U4 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Npc1l1Q6T3U4 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Npc1l1Q6T3U4 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Npc1l1Q6T3U4 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC17.47■□□□□ 0.39
Npc1l1Q6T3U4 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC17.47■□□□□ 0.39
Npc1l1Q6T3U4 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Npc1l1Q6T3U4 Gm9719-201ENSMUST00000162765 543 ntBASIC17.47■□□□□ 0.39
Npc1l1Q6T3U4 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Npc1l1Q6T3U4 Gm7730-201ENSMUST00000212486 454 ntBASIC17.47■□□□□ 0.39
Npc1l1Q6T3U4 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC17.47■□□□□ 0.39
Npc1l1Q6T3U4 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Npc1l1Q6T3U4 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Npc1l1Q6T3U4 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Npc1l1Q6T3U4 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Npc1l1Q6T3U4 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Npc1l1Q6T3U4 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Npc1l1Q6T3U4 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Npc1l1Q6T3U4 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Npc1l1Q6T3U4 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Npc1l1Q6T3U4 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Npc1l1Q6T3U4 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Npc1l1Q6T3U4 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Npc1l1Q6T3U4 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Npc1l1Q6T3U4 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Npc1l1Q6T3U4 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Npc1l1Q6T3U4 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Npc1l1Q6T3U4 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Npc1l1Q6T3U4 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Npc1l1Q6T3U4 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Npc1l1Q6T3U4 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Npc1l1Q6T3U4 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.47■□□□□ 0.39
Npc1l1Q6T3U4 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Npc1l1Q6T3U4 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Npc1l1Q6T3U4 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC17.47■□□□□ 0.39
Npc1l1Q6T3U4 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC17.47■□□□□ 0.39
Npc1l1Q6T3U4 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Npc1l1Q6T3U4 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Npc1l1Q6T3U4 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC17.47■□□□□ 0.39
Npc1l1Q6T3U4 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Npc1l1Q6T3U4 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Npc1l1Q6T3U4 Gm37305-201ENSMUST00000195714 4279 ntBASIC17.46■□□□□ 0.39
Npc1l1Q6T3U4 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Npc1l1Q6T3U4 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Npc1l1Q6T3U4 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Npc1l1Q6T3U4 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Npc1l1Q6T3U4 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Npc1l1Q6T3U4 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Npc1l1Q6T3U4 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
Npc1l1Q6T3U4 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
Npc1l1Q6T3U4 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Npc1l1Q6T3U4 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC17.46■□□□□ 0.38
Npc1l1Q6T3U4 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Npc1l1Q6T3U4 Gm16215-201ENSMUST00000161990 637 ntBASIC17.46■□□□□ 0.38
Npc1l1Q6T3U4 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
Npc1l1Q6T3U4 Gm27533-201ENSMUST00000183800 152 ntBASIC17.46■□□□□ 0.38
Npc1l1Q6T3U4 Gm29310-201ENSMUST00000185468 696 ntBASIC17.46■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms