Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col11a1Q61245 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col11a1Q61245 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Col11a1Q61245 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.17
Col11a1Q61245 Gm16177-201ENSMUST00000120728 718 ntBASIC16.08■□□□□ 0.17
Col11a1Q61245 Gm29649-201ENSMUST00000185649 419 ntBASIC16.08■□□□□ 0.17
Col11a1Q61245 Gm38002-201ENSMUST00000193255 180 ntBASIC16.08■□□□□ 0.17
Col11a1Q61245 Gm43758-201ENSMUST00000199500 367 ntBASIC16.08■□□□□ 0.17
Col11a1Q61245 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.08■□□□□ 0.17
Col11a1Q61245 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Col11a1Q61245 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Col11a1Q61245 AC154276.1-201ENSMUST00000228874 1299 ntBASIC16.08■□□□□ 0.17
Col11a1Q61245 Mir497b-201ENSMUST00000093601 125 ntBASIC16.08■□□□□ 0.17
Col11a1Q61245 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col11a1Q61245 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col11a1Q61245 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col11a1Q61245 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col11a1Q61245 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col11a1Q61245 Gm37015-201ENSMUST00000192763 1521 ntBASIC16.08■□□□□ 0.16
Col11a1Q61245 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col11a1Q61245 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col11a1Q61245 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC16.08■□□□□ 0.16
Col11a1Q61245 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col11a1Q61245 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.08■□□□□ 0.16
Col11a1Q61245 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col11a1Q61245 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col11a1Q61245 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
Col11a1Q61245 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col11a1Q61245 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col11a1Q61245 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col11a1Q61245 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Col11a1Q61245 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Col11a1Q61245 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Col11a1Q61245 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col11a1Q61245 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col11a1Q61245 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col11a1Q61245 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Col11a1Q61245 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
Col11a1Q61245 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC16.08■□□□□ 0.16
Col11a1Q61245 Proscos-202ENSMUST00000178990 666 ntBASIC16.08■□□□□ 0.16
Col11a1Q61245 Gm27772-201ENSMUST00000184900 187 ntBASIC16.08■□□□□ 0.16
Col11a1Q61245 Gm18473-201ENSMUST00000220543 868 ntBASIC16.08■□□□□ 0.16
Col11a1Q61245 Gm45930-201ENSMUST00000221330 292 ntBASIC16.08■□□□□ 0.16
Col11a1Q61245 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
Col11a1Q61245 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
Col11a1Q61245 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Col11a1Q61245 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Col11a1Q61245 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col11a1Q61245 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Col11a1Q61245 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Col11a1Q61245 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col11a1Q61245 Gm10339-203ENSMUST00000225409 1671 ntBASIC16.07■□□□□ 0.16
Col11a1Q61245 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col11a1Q61245 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.07■□□□□ 0.16
Col11a1Q61245 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col11a1Q61245 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Col11a1Q61245 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Col11a1Q61245 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Col11a1Q61245 Gm26083-201ENSMUST00000157904 193 ntBASIC16.07■□□□□ 0.16
Col11a1Q61245 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC16.07■□□□□ 0.16
Col11a1Q61245 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Col11a1Q61245 Gm27331-201ENSMUST00000183705 60 ntBASIC16.07■□□□□ 0.16
Col11a1Q61245 Gm6013-201ENSMUST00000212264 699 ntBASIC16.07■□□□□ 0.16
Col11a1Q61245 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col11a1Q61245 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.07■□□□□ 0.16
Col11a1Q61245 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Col11a1Q61245 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
Col11a1Q61245 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Col11a1Q61245 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col11a1Q61245 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col11a1Q61245 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Col11a1Q61245 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col11a1Q61245 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC16.07■□□□□ 0.16
Col11a1Q61245 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Col11a1Q61245 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col11a1Q61245 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Col11a1Q61245 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC16.06■□□□□ 0.16
Col11a1Q61245 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col11a1Q61245 Ighv1-51-201ENSMUST00000192903 354 ntBASIC16.06■□□□□ 0.16
Col11a1Q61245 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC16.06■□□□□ 0.16
Col11a1Q61245 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC16.06■□□□□ 0.16
Col11a1Q61245 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Col11a1Q61245 Gm17383-201ENSMUST00000078739 1041 ntBASIC16.06■□□□□ 0.16
Col11a1Q61245 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Col11a1Q61245 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.06■□□□□ 0.16
Col11a1Q61245 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col11a1Q61245 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col11a1Q61245 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col11a1Q61245 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.06■□□□□ 0.16
Col11a1Q61245 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col11a1Q61245 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Col11a1Q61245 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col11a1Q61245 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.06■□□□□ 0.16
Col11a1Q61245 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col11a1Q61245 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC16.05■□□□□ 0.16
Col11a1Q61245 Mir3102-201ENSMUST00000175555 104 ntBASIC16.05■□□□□ 0.16
Col11a1Q61245 Gm27516-201ENSMUST00000184237 98 ntBASIC16.05■□□□□ 0.16
Col11a1Q61245 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC16.05■□□□□ 0.16
Col11a1Q61245 Gm3961-201ENSMUST00000204425 994 ntBASIC16.05■□□□□ 0.16
Col11a1Q61245 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms