Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shroom1Q5SX79 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.57■□□□□ 0.08
Shroom1Q5SX79 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shroom1Q5SX79 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shroom1Q5SX79 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shroom1Q5SX79 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Shroom1Q5SX79 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shroom1Q5SX79 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shroom1Q5SX79 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shroom1Q5SX79 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shroom1Q5SX79 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Shroom1Q5SX79 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Shroom1Q5SX79 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Shroom1Q5SX79 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Shroom1Q5SX79 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Shroom1Q5SX79 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Shroom1Q5SX79 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
Shroom1Q5SX79 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Shroom1Q5SX79 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Shroom1Q5SX79 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Shroom1Q5SX79 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Shroom1Q5SX79 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Shroom1Q5SX79 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Shroom1Q5SX79 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Shroom1Q5SX79 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Shroom1Q5SX79 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.56■□□□□ 0.08
Shroom1Q5SX79 Gm27437-201ENSMUST00000183429 107 ntBASIC15.56■□□□□ 0.08
Shroom1Q5SX79 Mir8102-201ENSMUST00000184148 139 ntBASIC15.56■□□□□ 0.08
Shroom1Q5SX79 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Shroom1Q5SX79 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC15.56■□□□□ 0.08
Shroom1Q5SX79 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Shroom1Q5SX79 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Shroom1Q5SX79 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Shroom1Q5SX79 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Shroom1Q5SX79 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Shroom1Q5SX79 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Shroom1Q5SX79 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Shroom1Q5SX79 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.56■□□□□ 0.08
Shroom1Q5SX79 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Shroom1Q5SX79 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Shroom1Q5SX79 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.56■□□□□ 0.08
Shroom1Q5SX79 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
Shroom1Q5SX79 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Shroom1Q5SX79 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Shroom1Q5SX79 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.56■□□□□ 0.08
Shroom1Q5SX79 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.56■□□□□ 0.08
Shroom1Q5SX79 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.56■□□□□ 0.08
Shroom1Q5SX79 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.56■□□□□ 0.08
Shroom1Q5SX79 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.56■□□□□ 0.08
Shroom1Q5SX79 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Shroom1Q5SX79 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Shroom1Q5SX79 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Shroom1Q5SX79 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Shroom1Q5SX79 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Shroom1Q5SX79 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
Shroom1Q5SX79 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Shroom1Q5SX79 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shroom1Q5SX79 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shroom1Q5SX79 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Shroom1Q5SX79 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shroom1Q5SX79 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Shroom1Q5SX79 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shroom1Q5SX79 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Shroom1Q5SX79 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Shroom1Q5SX79 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Shroom1Q5SX79 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shroom1Q5SX79 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC15.55■□□□□ 0.08
Shroom1Q5SX79 Mir7684-201ENSMUST00000183858 60 ntBASIC15.55■□□□□ 0.08
Shroom1Q5SX79 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.55■□□□□ 0.08
Shroom1Q5SX79 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.55■□□□□ 0.08
Shroom1Q5SX79 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC15.55■□□□□ 0.08
Shroom1Q5SX79 Rbfox2-208ENSMUST00000227930 1218 ntBASIC15.55■□□□□ 0.08
Shroom1Q5SX79 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shroom1Q5SX79 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Shroom1Q5SX79 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Shroom1Q5SX79 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Shroom1Q5SX79 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shroom1Q5SX79 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shroom1Q5SX79 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Shroom1Q5SX79 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shroom1Q5SX79 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shroom1Q5SX79 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shroom1Q5SX79 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shroom1Q5SX79 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Shroom1Q5SX79 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shroom1Q5SX79 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.54■□□□□ 0.08
Shroom1Q5SX79 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shroom1Q5SX79 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shroom1Q5SX79 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shroom1Q5SX79 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Shroom1Q5SX79 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shroom1Q5SX79 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shroom1Q5SX79 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shroom1Q5SX79 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shroom1Q5SX79 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Shroom1Q5SX79 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Shroom1Q5SX79 Gm8410-201ENSMUST00000117225 605 ntBASIC15.54■□□□□ 0.08
Shroom1Q5SX79 Gm18766-201ENSMUST00000189811 808 ntBASIC15.54■□□□□ 0.08
Shroom1Q5SX79 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.54■□□□□ 0.08
Shroom1Q5SX79 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms