Protein–RNA interactions for Protein: Q5RJF7

Cacna2d4, Voltage-dependent calcium channel subunit alpha-2/delta-4, mousemouse

Predictions only

Length 1,116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna2d4Q5RJF7 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna2d4Q5RJF7 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cacna2d4Q5RJF7 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Cacna2d4Q5RJF7 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna2d4Q5RJF7 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna2d4Q5RJF7 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna2d4Q5RJF7 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna2d4Q5RJF7 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Cacna2d4Q5RJF7 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cacna2d4Q5RJF7 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cacna2d4Q5RJF7 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Cacna2d4Q5RJF7 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cacna2d4Q5RJF7 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cacna2d4Q5RJF7 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cacna2d4Q5RJF7 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cacna2d4Q5RJF7 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cacna2d4Q5RJF7 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cacna2d4Q5RJF7 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Cacna2d4Q5RJF7 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.3■□□□□ 0.2
Cacna2d4Q5RJF7 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC16.3■□□□□ 0.2
Cacna2d4Q5RJF7 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.3■□□□□ 0.2
Cacna2d4Q5RJF7 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cacna2d4Q5RJF7 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16.3■□□□□ 0.2
Cacna2d4Q5RJF7 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cacna2d4Q5RJF7 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cacna2d4Q5RJF7 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cacna2d4Q5RJF7 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cacna2d4Q5RJF7 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cacna2d4Q5RJF7 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.3■□□□□ 0.2
Cacna2d4Q5RJF7 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cacna2d4Q5RJF7 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cacna2d4Q5RJF7 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cacna2d4Q5RJF7 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cacna2d4Q5RJF7 Gm5648-201ENSMUST00000122244 1587 ntBASIC16.3■□□□□ 0.2
Cacna2d4Q5RJF7 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cacna2d4Q5RJF7 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cacna2d4Q5RJF7 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cacna2d4Q5RJF7 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cacna2d4Q5RJF7 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cacna2d4Q5RJF7 AC164565.1-201ENSMUST00000217520 1484 ntBASIC16.29■□□□□ 0.2
Cacna2d4Q5RJF7 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.29■□□□□ 0.2
Cacna2d4Q5RJF7 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cacna2d4Q5RJF7 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cacna2d4Q5RJF7 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cacna2d4Q5RJF7 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Cacna2d4Q5RJF7 Nrn1-204ENSMUST00000224323 1779 ntBASIC16.29■□□□□ 0.2
Cacna2d4Q5RJF7 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
Cacna2d4Q5RJF7 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cacna2d4Q5RJF7 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cacna2d4Q5RJF7 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cacna2d4Q5RJF7 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cacna2d4Q5RJF7 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.29■□□□□ 0.2
Cacna2d4Q5RJF7 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cacna2d4Q5RJF7 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cacna2d4Q5RJF7 Gpr146-202ENSMUST00000053120 1040 ntBASIC16.29■□□□□ 0.2
Cacna2d4Q5RJF7 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cacna2d4Q5RJF7 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cacna2d4Q5RJF7 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cacna2d4Q5RJF7 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cacna2d4Q5RJF7 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cacna2d4Q5RJF7 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cacna2d4Q5RJF7 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cacna2d4Q5RJF7 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cacna2d4Q5RJF7 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.28■□□□□ 0.2
Cacna2d4Q5RJF7 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cacna2d4Q5RJF7 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cacna2d4Q5RJF7 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.28■□□□□ 0.2
Cacna2d4Q5RJF7 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cacna2d4Q5RJF7 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cacna2d4Q5RJF7 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cacna2d4Q5RJF7 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cacna2d4Q5RJF7 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cacna2d4Q5RJF7 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.28■□□□□ 0.2
Cacna2d4Q5RJF7 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cacna2d4Q5RJF7 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Cacna2d4Q5RJF7 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Cacna2d4Q5RJF7 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Cacna2d4Q5RJF7 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC16.28■□□□□ 0.2
Cacna2d4Q5RJF7 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
Cacna2d4Q5RJF7 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cacna2d4Q5RJF7 Gm37935-201ENSMUST00000192012 982 ntBASIC16.28■□□□□ 0.2
Cacna2d4Q5RJF7 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.28■□□□□ 0.2
Cacna2d4Q5RJF7 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Cacna2d4Q5RJF7 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.28■□□□□ 0.2
Cacna2d4Q5RJF7 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC16.28■□□□□ 0.2
Cacna2d4Q5RJF7 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cacna2d4Q5RJF7 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cacna2d4Q5RJF7 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cacna2d4Q5RJF7 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC16.28■□□□□ 0.2
Cacna2d4Q5RJF7 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cacna2d4Q5RJF7 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cacna2d4Q5RJF7 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cacna2d4Q5RJF7 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cacna2d4Q5RJF7 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cacna2d4Q5RJF7 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cacna2d4Q5RJF7 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cacna2d4Q5RJF7 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cacna2d4Q5RJF7 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cacna2d4Q5RJF7 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cacna2d4Q5RJF7 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms