Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3-1Q5R1I8 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3-1Q5R1I8 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3-1Q5R1I8 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3-1Q5R1I8 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3-1Q5R1I8 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Trav3-1Q5R1I8 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3-1Q5R1I8 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3-1Q5R1I8 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC9.84□□□□□ -0.83
Trav3-1Q5R1I8 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC9.84□□□□□ -0.83
Trav3-1Q5R1I8 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC9.84□□□□□ -0.83
Trav3-1Q5R1I8 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC9.84□□□□□ -0.83
Trav3-1Q5R1I8 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC9.84□□□□□ -0.83
Trav3-1Q5R1I8 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3-1Q5R1I8 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC9.84□□□□□ -0.83
Trav3-1Q5R1I8 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC9.84□□□□□ -0.83
Trav3-1Q5R1I8 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Trav3-1Q5R1I8 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3-1Q5R1I8 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3-1Q5R1I8 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3-1Q5R1I8 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3-1Q5R1I8 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3-1Q5R1I8 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC9.84□□□□□ -0.83
Trav3-1Q5R1I8 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC9.84□□□□□ -0.83
Trav3-1Q5R1I8 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3-1Q5R1I8 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3-1Q5R1I8 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3-1Q5R1I8 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3-1Q5R1I8 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC9.84□□□□□ -0.83
Trav3-1Q5R1I8 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3-1Q5R1I8 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3-1Q5R1I8 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Trav3-1Q5R1I8 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3-1Q5R1I8 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3-1Q5R1I8 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3-1Q5R1I8 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3-1Q5R1I8 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3-1Q5R1I8 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3-1Q5R1I8 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3-1Q5R1I8 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Trav3-1Q5R1I8 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3-1Q5R1I8 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3-1Q5R1I8 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3-1Q5R1I8 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Trav3-1Q5R1I8 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC9.83□□□□□ -0.84
Trav3-1Q5R1I8 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Trav3-1Q5R1I8 Gm12251-201ENSMUST00000117893 792 ntBASIC9.83□□□□□ -0.84
Trav3-1Q5R1I8 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Trav3-1Q5R1I8 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC9.83□□□□□ -0.84
Trav3-1Q5R1I8 Smad6-203ENSMUST00000179458 273 ntBASIC9.83□□□□□ -0.84
Trav3-1Q5R1I8 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC9.83□□□□□ -0.84
Trav3-1Q5R1I8 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3-1Q5R1I8 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3-1Q5R1I8 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3-1Q5R1I8 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC9.83□□□□□ -0.84
Trav3-1Q5R1I8 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3-1Q5R1I8 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3-1Q5R1I8 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3-1Q5R1I8 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3-1Q5R1I8 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Trav3-1Q5R1I8 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3-1Q5R1I8 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3-1Q5R1I8 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3-1Q5R1I8 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3-1Q5R1I8 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3-1Q5R1I8 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3-1Q5R1I8 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-1Q5R1I8 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
Trav3-1Q5R1I8 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC9.82□□□□□ -0.84
Trav3-1Q5R1I8 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-1Q5R1I8 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-1Q5R1I8 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-1Q5R1I8 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-1Q5R1I8 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-1Q5R1I8 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
Trav3-1Q5R1I8 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-1Q5R1I8 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-1Q5R1I8 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-1Q5R1I8 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC9.82□□□□□ -0.84
Trav3-1Q5R1I8 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-1Q5R1I8 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-1Q5R1I8 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-1Q5R1I8 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
Trav3-1Q5R1I8 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
Trav3-1Q5R1I8 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC9.82□□□□□ -0.84
Trav3-1Q5R1I8 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-1Q5R1I8 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC9.82□□□□□ -0.84
Trav3-1Q5R1I8 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
Trav3-1Q5R1I8 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC9.82□□□□□ -0.84
Trav3-1Q5R1I8 Gm22238-201ENSMUST00000175222 88 ntBASIC9.82□□□□□ -0.84
Trav3-1Q5R1I8 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-1Q5R1I8 AC159205.3-201ENSMUST00000224614 874 ntBASIC9.82□□□□□ -0.84
Trav3-1Q5R1I8 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-1Q5R1I8 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-1Q5R1I8 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-1Q5R1I8 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-1Q5R1I8 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-1Q5R1I8 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC9.82□□□□□ -0.84
Trav3-1Q5R1I8 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-1Q5R1I8 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms