Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav6-3Q5R1E6 Gm13036-201ENSMUST00000117799 748 ntBASIC11.76□□□□□ -0.53
Trav6-3Q5R1E6 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC11.76□□□□□ -0.53
Trav6-3Q5R1E6 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC11.76□□□□□ -0.53
Trav6-3Q5R1E6 Gm6944-201ENSMUST00000182449 1006 ntBASIC11.76□□□□□ -0.53
Trav6-3Q5R1E6 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC11.76□□□□□ -0.53
Trav6-3Q5R1E6 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-3Q5R1E6 Gm2272-201ENSMUST00000194903 582 ntBASIC11.76□□□□□ -0.53
Trav6-3Q5R1E6 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-3Q5R1E6 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-3Q5R1E6 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC11.76□□□□□ -0.53
Trav6-3Q5R1E6 AC131709.1-201ENSMUST00000224731 1180 ntBASIC11.76□□□□□ -0.53
Trav6-3Q5R1E6 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-3Q5R1E6 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-3Q5R1E6 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-3Q5R1E6 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-3Q5R1E6 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-3Q5R1E6 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
Trav6-3Q5R1E6 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC11.76□□□□□ -0.53
Trav6-3Q5R1E6 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-3Q5R1E6 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-3Q5R1E6 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-3Q5R1E6 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-3Q5R1E6 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-3Q5R1E6 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-3Q5R1E6 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-3Q5R1E6 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-3Q5R1E6 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-3Q5R1E6 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-3Q5R1E6 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Trav6-3Q5R1E6 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-3Q5R1E6 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-3Q5R1E6 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-3Q5R1E6 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-3Q5R1E6 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-3Q5R1E6 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-3Q5R1E6 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trav6-3Q5R1E6 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav6-3Q5R1E6 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav6-3Q5R1E6 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-3Q5R1E6 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-3Q5R1E6 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-3Q5R1E6 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-3Q5R1E6 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trav6-3Q5R1E6 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-3Q5R1E6 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-3Q5R1E6 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-3Q5R1E6 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-3Q5R1E6 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-3Q5R1E6 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-3Q5R1E6 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav6-3Q5R1E6 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav6-3Q5R1E6 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav6-3Q5R1E6 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC11.75□□□□□ -0.53
Trav6-3Q5R1E6 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC11.75□□□□□ -0.53
Trav6-3Q5R1E6 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-3Q5R1E6 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-3Q5R1E6 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-3Q5R1E6 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC11.75□□□□□ -0.53
Trav6-3Q5R1E6 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-3Q5R1E6 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-3Q5R1E6 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-3Q5R1E6 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-3Q5R1E6 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-3Q5R1E6 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Trav6-3Q5R1E6 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-3Q5R1E6 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trav6-3Q5R1E6 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trav6-3Q5R1E6 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-3Q5R1E6 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-3Q5R1E6 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-3Q5R1E6 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-3Q5R1E6 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-3Q5R1E6 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-3Q5R1E6 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-3Q5R1E6 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-3Q5R1E6 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-3Q5R1E6 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav6-3Q5R1E6 Gm14042-201ENSMUST00000120139 833 ntBASIC11.74□□□□□ -0.53
Trav6-3Q5R1E6 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-3Q5R1E6 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC11.74□□□□□ -0.53
Trav6-3Q5R1E6 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-3Q5R1E6 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-3Q5R1E6 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-3Q5R1E6 Gm4691-201ENSMUST00000182339 1000 ntBASIC11.74□□□□□ -0.53
Trav6-3Q5R1E6 Mir8098-201ENSMUST00000184011 137 ntBASIC11.74□□□□□ -0.53
Trav6-3Q5R1E6 Gm2451-201ENSMUST00000199447 999 ntBASIC11.74□□□□□ -0.53
Trav6-3Q5R1E6 Gm10290-201ENSMUST00000200451 999 ntBASIC11.74□□□□□ -0.53
Trav6-3Q5R1E6 Olfr286-202ENSMUST00000205305 969 ntBASIC11.74□□□□□ -0.53
Trav6-3Q5R1E6 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC11.74□□□□□ -0.53
Trav6-3Q5R1E6 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-3Q5R1E6 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-3Q5R1E6 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav6-3Q5R1E6 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Trav6-3Q5R1E6 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-3Q5R1E6 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-3Q5R1E6 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav6-3Q5R1E6 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-3Q5R1E6 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-3Q5R1E6 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms