Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf20Q5DTM8 Gm9856-201ENSMUST00000217077 2578 ntBASIC17.42■□□□□ 0.38
Rnf20Q5DTM8 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf20Q5DTM8 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf20Q5DTM8 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Rnf20Q5DTM8 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf20Q5DTM8 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf20Q5DTM8 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf20Q5DTM8 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf20Q5DTM8 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC17.42■□□□□ 0.38
Rnf20Q5DTM8 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC17.42■□□□□ 0.38
Rnf20Q5DTM8 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC17.42■□□□□ 0.38
Rnf20Q5DTM8 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.42■□□□□ 0.38
Rnf20Q5DTM8 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Rnf20Q5DTM8 Mir3113-201ENSMUST00000175478 76 ntBASIC17.42■□□□□ 0.38
Rnf20Q5DTM8 Olfr286-202ENSMUST00000205305 969 ntBASIC17.42■□□□□ 0.38
Rnf20Q5DTM8 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.42■□□□□ 0.38
Rnf20Q5DTM8 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf20Q5DTM8 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf20Q5DTM8 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
Rnf20Q5DTM8 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf20Q5DTM8 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Rnf20Q5DTM8 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf20Q5DTM8 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf20Q5DTM8 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.42■□□□□ 0.38
Rnf20Q5DTM8 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf20Q5DTM8 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf20Q5DTM8 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf20Q5DTM8 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf20Q5DTM8 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf20Q5DTM8 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC17.41■□□□□ 0.38
Rnf20Q5DTM8 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Rnf20Q5DTM8 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Rnf20Q5DTM8 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Rnf20Q5DTM8 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf20Q5DTM8 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf20Q5DTM8 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf20Q5DTM8 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf20Q5DTM8 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf20Q5DTM8 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf20Q5DTM8 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Rnf20Q5DTM8 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.41■□□□□ 0.38
Rnf20Q5DTM8 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC17.41■□□□□ 0.38
Rnf20Q5DTM8 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Rnf20Q5DTM8 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf20Q5DTM8 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf20Q5DTM8 Gm37297-201ENSMUST00000192974 2384 ntBASIC17.41■□□□□ 0.38
Rnf20Q5DTM8 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Rnf20Q5DTM8 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf20Q5DTM8 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf20Q5DTM8 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf20Q5DTM8 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Rnf20Q5DTM8 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf20Q5DTM8 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf20Q5DTM8 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Rnf20Q5DTM8 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf20Q5DTM8 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Rnf20Q5DTM8 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf20Q5DTM8 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Rnf20Q5DTM8 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf20Q5DTM8 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf20Q5DTM8 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf20Q5DTM8 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf20Q5DTM8 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf20Q5DTM8 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf20Q5DTM8 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Rnf20Q5DTM8 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf20Q5DTM8 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.4■□□□□ 0.38
Rnf20Q5DTM8 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.4■□□□□ 0.38
Rnf20Q5DTM8 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC17.4■□□□□ 0.38
Rnf20Q5DTM8 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.4■□□□□ 0.38
Rnf20Q5DTM8 Gm9182-201ENSMUST00000217829 639 ntBASIC17.4■□□□□ 0.38
Rnf20Q5DTM8 CT025555.1-201ENSMUST00000225901 1217 ntBASIC17.4■□□□□ 0.38
Rnf20Q5DTM8 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf20Q5DTM8 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf20Q5DTM8 Gm44981-201ENSMUST00000205549 1943 ntBASIC17.4■□□□□ 0.38
Rnf20Q5DTM8 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC17.4■□□□□ 0.38
Rnf20Q5DTM8 AC126250.1-201ENSMUST00000228343 1768 ntBASIC17.4■□□□□ 0.38
Rnf20Q5DTM8 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf20Q5DTM8 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.38
Rnf20Q5DTM8 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Rnf20Q5DTM8 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC17.39■□□□□ 0.37
Rnf20Q5DTM8 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC17.39■□□□□ 0.37
Rnf20Q5DTM8 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf20Q5DTM8 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf20Q5DTM8 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf20Q5DTM8 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf20Q5DTM8 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Rnf20Q5DTM8 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Rnf20Q5DTM8 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Rnf20Q5DTM8 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf20Q5DTM8 Gm15427-201ENSMUST00000117288 531 ntBASIC17.39■□□□□ 0.37
Rnf20Q5DTM8 Gm12892-201ENSMUST00000117367 1146 ntBASIC17.39■□□□□ 0.37
Rnf20Q5DTM8 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC17.39■□□□□ 0.37
Rnf20Q5DTM8 Gm17271-201ENSMUST00000165535 355 ntBASIC17.39■□□□□ 0.37
Rnf20Q5DTM8 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Rnf20Q5DTM8 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf20Q5DTM8 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf20Q5DTM8 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf20Q5DTM8 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms