Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Naf1Q3UMQ8 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Naf1Q3UMQ8 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Naf1Q3UMQ8 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Naf1Q3UMQ8 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Naf1Q3UMQ8 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Naf1Q3UMQ8 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Naf1Q3UMQ8 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Naf1Q3UMQ8 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Naf1Q3UMQ8 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Naf1Q3UMQ8 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Naf1Q3UMQ8 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Naf1Q3UMQ8 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Naf1Q3UMQ8 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.88□□□□□ -0.03
Naf1Q3UMQ8 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.88□□□□□ -0.03
Naf1Q3UMQ8 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.88□□□□□ -0.03
Naf1Q3UMQ8 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Naf1Q3UMQ8 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Naf1Q3UMQ8 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Naf1Q3UMQ8 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Naf1Q3UMQ8 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Naf1Q3UMQ8 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Naf1Q3UMQ8 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Naf1Q3UMQ8 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Naf1Q3UMQ8 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Naf1Q3UMQ8 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.88□□□□□ -0.03
Naf1Q3UMQ8 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Naf1Q3UMQ8 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Naf1Q3UMQ8 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Naf1Q3UMQ8 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Naf1Q3UMQ8 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Naf1Q3UMQ8 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Naf1Q3UMQ8 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Naf1Q3UMQ8 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.87□□□□□ -0.03
Naf1Q3UMQ8 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Naf1Q3UMQ8 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Naf1Q3UMQ8 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Naf1Q3UMQ8 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
Naf1Q3UMQ8 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Naf1Q3UMQ8 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Naf1Q3UMQ8 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Naf1Q3UMQ8 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Naf1Q3UMQ8 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Naf1Q3UMQ8 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Naf1Q3UMQ8 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Naf1Q3UMQ8 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Naf1Q3UMQ8 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Naf1Q3UMQ8 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Naf1Q3UMQ8 Gm8749-201ENSMUST00000117737 331 ntBASIC14.87□□□□□ -0.03
Naf1Q3UMQ8 Gm13823-201ENSMUST00000119930 345 ntBASIC14.87□□□□□ -0.03
Naf1Q3UMQ8 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Naf1Q3UMQ8 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.87□□□□□ -0.03
Naf1Q3UMQ8 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.87□□□□□ -0.03
Naf1Q3UMQ8 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Naf1Q3UMQ8 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Naf1Q3UMQ8 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Naf1Q3UMQ8 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Naf1Q3UMQ8 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Naf1Q3UMQ8 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Naf1Q3UMQ8 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Naf1Q3UMQ8 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Naf1Q3UMQ8 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.87□□□□□ -0.03
Naf1Q3UMQ8 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Naf1Q3UMQ8 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Naf1Q3UMQ8 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.87□□□□□ -0.03
Naf1Q3UMQ8 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Naf1Q3UMQ8 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Naf1Q3UMQ8 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Naf1Q3UMQ8 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Naf1Q3UMQ8 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Naf1Q3UMQ8 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Naf1Q3UMQ8 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Naf1Q3UMQ8 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.86□□□□□ -0.03
Naf1Q3UMQ8 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Naf1Q3UMQ8 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Naf1Q3UMQ8 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Naf1Q3UMQ8 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Naf1Q3UMQ8 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Naf1Q3UMQ8 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Naf1Q3UMQ8 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.86□□□□□ -0.03
Naf1Q3UMQ8 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Naf1Q3UMQ8 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Naf1Q3UMQ8 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Naf1Q3UMQ8 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Naf1Q3UMQ8 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Naf1Q3UMQ8 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Naf1Q3UMQ8 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Naf1Q3UMQ8 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Naf1Q3UMQ8 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Naf1Q3UMQ8 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
Naf1Q3UMQ8 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Naf1Q3UMQ8 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Naf1Q3UMQ8 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Naf1Q3UMQ8 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Naf1Q3UMQ8 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Naf1Q3UMQ8 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Naf1Q3UMQ8 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Naf1Q3UMQ8 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Naf1Q3UMQ8 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Naf1Q3UMQ8 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms