Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim63Q38HM4 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim63Q38HM4 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim63Q38HM4 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim63Q38HM4 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim63Q38HM4 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim63Q38HM4 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim63Q38HM4 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim63Q38HM4 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim63Q38HM4 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim63Q38HM4 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.08□□□□□ -0.48
Trim63Q38HM4 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim63Q38HM4 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim63Q38HM4 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim63Q38HM4 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim63Q38HM4 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim63Q38HM4 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim63Q38HM4 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim63Q38HM4 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim63Q38HM4 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim63Q38HM4 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim63Q38HM4 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim63Q38HM4 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim63Q38HM4 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim63Q38HM4 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC12.07□□□□□ -0.48
Trim63Q38HM4 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim63Q38HM4 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC12.07□□□□□ -0.48
Trim63Q38HM4 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim63Q38HM4 Gm10517-202ENSMUST00000192970 758 ntBASIC12.07□□□□□ -0.48
Trim63Q38HM4 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim63Q38HM4 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC12.07□□□□□ -0.48
Trim63Q38HM4 AC166341.7-201ENSMUST00000221698 126 ntBASIC12.07□□□□□ -0.48
Trim63Q38HM4 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim63Q38HM4 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim63Q38HM4 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim63Q38HM4 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim63Q38HM4 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.07□□□□□ -0.48
Trim63Q38HM4 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trim63Q38HM4 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim63Q38HM4 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trim63Q38HM4 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim63Q38HM4 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.07□□□□□ -0.48
Trim63Q38HM4 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim63Q38HM4 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.07□□□□□ -0.48
Trim63Q38HM4 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim63Q38HM4 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim63Q38HM4 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim63Q38HM4 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim63Q38HM4 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim63Q38HM4 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim63Q38HM4 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim63Q38HM4 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trim63Q38HM4 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim63Q38HM4 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trim63Q38HM4 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim63Q38HM4 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Trim63Q38HM4 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim63Q38HM4 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim63Q38HM4 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim63Q38HM4 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trim63Q38HM4 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim63Q38HM4 Gm15847-201ENSMUST00000121417 1065 ntBASIC12.06□□□□□ -0.48
Trim63Q38HM4 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trim63Q38HM4 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC12.06□□□□□ -0.48
Trim63Q38HM4 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC12.06□□□□□ -0.48
Trim63Q38HM4 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trim63Q38HM4 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC12.06□□□□□ -0.48
Trim63Q38HM4 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim63Q38HM4 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim63Q38HM4 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim63Q38HM4 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim63Q38HM4 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim63Q38HM4 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim63Q38HM4 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trim63Q38HM4 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim63Q38HM4 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim63Q38HM4 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.06□□□□□ -0.48
Trim63Q38HM4 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim63Q38HM4 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim63Q38HM4 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.06□□□□□ -0.48
Trim63Q38HM4 Grk6-205ENSMUST00000224653 2976 ntBASIC12.06□□□□□ -0.48
Trim63Q38HM4 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trim63Q38HM4 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim63Q38HM4 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim63Q38HM4 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim63Q38HM4 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim63Q38HM4 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim63Q38HM4 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.05□□□□□ -0.48
Trim63Q38HM4 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim63Q38HM4 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim63Q38HM4 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trim63Q38HM4 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.05□□□□□ -0.48
Trim63Q38HM4 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim63Q38HM4 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.05□□□□□ -0.48
Trim63Q38HM4 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim63Q38HM4 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim63Q38HM4 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim63Q38HM4 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trim63Q38HM4 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim63Q38HM4 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms