Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim43cP86449 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trim43cP86449 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim43cP86449 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim43cP86449 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Trim43cP86449 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.91■□□□□ 0.14
Trim43cP86449 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim43cP86449 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trim43cP86449 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trim43cP86449 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15.91■□□□□ 0.14
Trim43cP86449 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim43cP86449 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim43cP86449 Gm17271-201ENSMUST00000165535 355 ntBASIC15.91■□□□□ 0.14
Trim43cP86449 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim43cP86449 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC15.91■□□□□ 0.14
Trim43cP86449 Gm18057-201ENSMUST00000208220 503 ntBASIC15.91■□□□□ 0.14
Trim43cP86449 CT943659.1-201ENSMUST00000215459 326 ntBASIC15.91■□□□□ 0.14
Trim43cP86449 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.91■□□□□ 0.14
Trim43cP86449 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim43cP86449 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.91■□□□□ 0.14
Trim43cP86449 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim43cP86449 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim43cP86449 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trim43cP86449 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC15.91■□□□□ 0.14
Trim43cP86449 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Trim43cP86449 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim43cP86449 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.91■□□□□ 0.14
Trim43cP86449 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trim43cP86449 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Trim43cP86449 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Trim43cP86449 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim43cP86449 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim43cP86449 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim43cP86449 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.9■□□□□ 0.14
Trim43cP86449 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trim43cP86449 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Trim43cP86449 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim43cP86449 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim43cP86449 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim43cP86449 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim43cP86449 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim43cP86449 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim43cP86449 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim43cP86449 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trim43cP86449 Gm13365-201ENSMUST00000121188 973 ntBASIC15.9■□□□□ 0.14
Trim43cP86449 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.9■□□□□ 0.14
Trim43cP86449 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trim43cP86449 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC15.9■□□□□ 0.14
Trim43cP86449 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trim43cP86449 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trim43cP86449 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Trim43cP86449 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim43cP86449 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim43cP86449 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trim43cP86449 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.9■□□□□ 0.14
Trim43cP86449 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim43cP86449 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim43cP86449 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trim43cP86449 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim43cP86449 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim43cP86449 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Trim43cP86449 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim43cP86449 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC15.89■□□□□ 0.13
Trim43cP86449 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim43cP86449 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trim43cP86449 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.89■□□□□ 0.13
Trim43cP86449 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim43cP86449 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim43cP86449 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim43cP86449 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.89■□□□□ 0.13
Trim43cP86449 Gm11594-201ENSMUST00000122313 162 ntBASIC15.89■□□□□ 0.13
Trim43cP86449 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC15.89■□□□□ 0.13
Trim43cP86449 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.89■□□□□ 0.13
Trim43cP86449 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.89■□□□□ 0.13
Trim43cP86449 Ndufaf2-202ENSMUST00000223734 556 ntBASIC15.89■□□□□ 0.13
Trim43cP86449 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15.89■□□□□ 0.13
Trim43cP86449 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.89■□□□□ 0.13
Trim43cP86449 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim43cP86449 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim43cP86449 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim43cP86449 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Trim43cP86449 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim43cP86449 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.89■□□□□ 0.13
Trim43cP86449 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim43cP86449 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trim43cP86449 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim43cP86449 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim43cP86449 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim43cP86449 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim43cP86449 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim43cP86449 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.89■□□□□ 0.13
Trim43cP86449 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim43cP86449 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim43cP86449 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim43cP86449 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim43cP86449 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trim43cP86449 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Trim43cP86449 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim43cP86449 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trim43cP86449 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms