Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.19□□□□□ -0.46
Pdlim4P70271 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.19□□□□□ -0.46
Pdlim4P70271 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pdlim4P70271 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pdlim4P70271 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.19□□□□□ -0.46
Pdlim4P70271 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pdlim4P70271 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Pdlim4P70271 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pdlim4P70271 Gm16198-201ENSMUST00000118766 670 ntBASIC12.19□□□□□ -0.46
Pdlim4P70271 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pdlim4P70271 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pdlim4P70271 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.19□□□□□ -0.46
Pdlim4P70271 AC132104.2-201ENSMUST00000215011 266 ntBASIC12.19□□□□□ -0.46
Pdlim4P70271 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pdlim4P70271 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pdlim4P70271 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pdlim4P70271 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.19□□□□□ -0.46
Pdlim4P70271 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pdlim4P70271 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pdlim4P70271 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pdlim4P70271 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pdlim4P70271 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pdlim4P70271 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pdlim4P70271 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pdlim4P70271 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pdlim4P70271 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim4P70271 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim4P70271 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim4P70271 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Pdlim4P70271 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.18□□□□□ -0.46
Pdlim4P70271 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim4P70271 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.18□□□□□ -0.46
Pdlim4P70271 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Pdlim4P70271 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.18□□□□□ -0.46
Pdlim4P70271 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim4P70271 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim4P70271 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim4P70271 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.18□□□□□ -0.46
Pdlim4P70271 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Pdlim4P70271 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim4P70271 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim4P70271 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim4P70271 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Pdlim4P70271 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.18□□□□□ -0.46
Pdlim4P70271 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.18□□□□□ -0.46
Pdlim4P70271 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim4P70271 Gm4913-201ENSMUST00000117075 1290 ntBASIC12.18□□□□□ -0.46
Pdlim4P70271 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC12.18□□□□□ -0.46
Pdlim4P70271 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.18□□□□□ -0.46
Pdlim4P70271 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim4P70271 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim4P70271 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim4P70271 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim4P70271 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim4P70271 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim4P70271 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim4P70271 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim4P70271 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Pdlim4P70271 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Pdlim4P70271 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim4P70271 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim4P70271 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.18□□□□□ -0.46
Pdlim4P70271 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim4P70271 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim4P70271 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim4P70271 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim4P70271 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim4P70271 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim4P70271 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim4P70271 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim4P70271 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim4P70271 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim4P70271 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim4P70271 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim4P70271 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim4P70271 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim4P70271 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pdlim4P70271 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim4P70271 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim4P70271 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim4P70271 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Pdlim4P70271 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.17□□□□□ -0.46
Pdlim4P70271 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12.17□□□□□ -0.46
Pdlim4P70271 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC12.17□□□□□ -0.46
Pdlim4P70271 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.17□□□□□ -0.46
Pdlim4P70271 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.17□□□□□ -0.46
Pdlim4P70271 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.17□□□□□ -0.46
Pdlim4P70271 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim4P70271 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim4P70271 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Pdlim4P70271 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim4P70271 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim4P70271 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim4P70271 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim4P70271 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim4P70271 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim4P70271 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Pdlim4P70271 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim4P70271 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim4P70271 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms