Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.7□□□□□ -0.22
Six5P70178 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.7□□□□□ -0.22
Six5P70178 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Six5P70178 Gm9182-201ENSMUST00000217829 639 ntBASIC13.7□□□□□ -0.22
Six5P70178 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.7□□□□□ -0.22
Six5P70178 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Six5P70178 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.7□□□□□ -0.22
Six5P70178 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.7□□□□□ -0.22
Six5P70178 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Six5P70178 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Six5P70178 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Six5P70178 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Six5P70178 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Six5P70178 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Six5P70178 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Six5P70178 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Six5P70178 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Six5P70178 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Six5P70178 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Six5P70178 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Six5P70178 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Six5P70178 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Six5P70178 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.69□□□□□ -0.22
Six5P70178 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Six5P70178 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Six5P70178 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Six5P70178 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.69□□□□□ -0.22
Six5P70178 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC13.69□□□□□ -0.22
Six5P70178 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Six5P70178 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Six5P70178 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Six5P70178 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Six5P70178 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.69□□□□□ -0.22
Six5P70178 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Six5P70178 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Six5P70178 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Six5P70178 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Six5P70178 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Six5P70178 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Six5P70178 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.69□□□□□ -0.22
Six5P70178 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Six5P70178 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Six5P70178 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.69□□□□□ -0.22
Six5P70178 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Six5P70178 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Six5P70178 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Six5P70178 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Six5P70178 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Six5P70178 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Six5P70178 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
Six5P70178 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.68□□□□□ -0.22
Six5P70178 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.68□□□□□ -0.22
Six5P70178 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.68□□□□□ -0.22
Six5P70178 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.68□□□□□ -0.22
Six5P70178 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Six5P70178 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Six5P70178 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Six5P70178 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Six5P70178 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Six5P70178 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.68□□□□□ -0.22
Six5P70178 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Six5P70178 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.68□□□□□ -0.22
Six5P70178 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Six5P70178 Gm6973-201ENSMUST00000117080 721 ntBASIC13.68□□□□□ -0.22
Six5P70178 Gm11543-201ENSMUST00000120758 370 ntBASIC13.68□□□□□ -0.22
Six5P70178 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.68□□□□□ -0.22
Six5P70178 Gm25911-201ENSMUST00000157621 56 ntBASIC13.68□□□□□ -0.22
Six5P70178 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.68□□□□□ -0.22
Six5P70178 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Six5P70178 Gm20553-201ENSMUST00000204205 844 ntBASIC13.68□□□□□ -0.22
Six5P70178 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Six5P70178 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Six5P70178 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Six5P70178 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Six5P70178 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Six5P70178 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Six5P70178 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Six5P70178 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Six5P70178 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Six5P70178 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Six5P70178 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Six5P70178 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Six5P70178 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Six5P70178 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Six5P70178 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Six5P70178 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Six5P70178 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Six5P70178 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Six5P70178 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Six5P70178 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Six5P70178 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Six5P70178 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Six5P70178 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Six5P70178 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Six5P70178 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Six5P70178 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Six5P70178 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Six5P70178 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Six5P70178 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Six5P70178 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms