Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tpm1P58771 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tpm1P58771 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tpm1P58771 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Tpm1P58771 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Tpm1P58771 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tpm1P58771 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Tpm1P58771 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Tpm1P58771 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Tpm1P58771 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tpm1P58771 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Tpm1P58771 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Tpm1P58771 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tpm1P58771 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tpm1P58771 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC16.36■□□□□ 0.21
Tpm1P58771 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tpm1P58771 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tpm1P58771 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tpm1P58771 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tpm1P58771 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tpm1P58771 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.35■□□□□ 0.21
Tpm1P58771 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tpm1P58771 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tpm1P58771 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Tpm1P58771 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Tpm1P58771 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Tpm1P58771 Gm15372-201ENSMUST00000120729 834 ntBASIC16.35■□□□□ 0.21
Tpm1P58771 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Tpm1P58771 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tpm1P58771 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.35■□□□□ 0.21
Tpm1P58771 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tpm1P58771 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Tpm1P58771 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Tpm1P58771 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Tpm1P58771 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Tpm1P58771 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tpm1P58771 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Tpm1P58771 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tpm1P58771 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Tpm1P58771 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tpm1P58771 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tpm1P58771 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tpm1P58771 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Tpm1P58771 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tpm1P58771 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tpm1P58771 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tpm1P58771 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tpm1P58771 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tpm1P58771 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Tpm1P58771 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Tpm1P58771 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.34■□□□□ 0.21
Tpm1P58771 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tpm1P58771 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tpm1P58771 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tpm1P58771 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tpm1P58771 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC16.34■□□□□ 0.21
Tpm1P58771 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tpm1P58771 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tpm1P58771 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tpm1P58771 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tpm1P58771 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tpm1P58771 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Tpm1P58771 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Tpm1P58771 Gm42471-201ENSMUST00000201457 1865 ntBASIC16.33■□□□□ 0.21
Tpm1P58771 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Tpm1P58771 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16.33■□□□□ 0.21
Tpm1P58771 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Tpm1P58771 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.33■□□□□ 0.21
Tpm1P58771 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Tpm1P58771 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.33■□□□□ 0.2
Tpm1P58771 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Tpm1P58771 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.33■□□□□ 0.2
Tpm1P58771 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.33■□□□□ 0.2
Tpm1P58771 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tpm1P58771 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tpm1P58771 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tpm1P58771 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tpm1P58771 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Tpm1P58771 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tpm1P58771 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Tpm1P58771 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tpm1P58771 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tpm1P58771 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Tpm1P58771 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Tpm1P58771 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tpm1P58771 Gm26513-201ENSMUST00000181802 2489 ntBASIC16.33■□□□□ 0.2
Tpm1P58771 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tpm1P58771 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
Tpm1P58771 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tpm1P58771 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Tpm1P58771 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tpm1P58771 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Tpm1P58771 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tpm1P58771 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tpm1P58771 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tpm1P58771 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Tpm1P58771 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tpm1P58771 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tpm1P58771 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
Tpm1P58771 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms