Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nub1P54729 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.75■□□□□ 0.11
Nub1P54729 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Nub1P54729 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.75■□□□□ 0.11
Nub1P54729 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nub1P54729 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.75■□□□□ 0.11
Nub1P54729 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.75■□□□□ 0.11
Nub1P54729 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Nub1P54729 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Nub1P54729 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
Nub1P54729 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Nub1P54729 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nub1P54729 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nub1P54729 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nub1P54729 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Nub1P54729 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Nub1P54729 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nub1P54729 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Nub1P54729 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Nub1P54729 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Nub1P54729 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nub1P54729 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
Nub1P54729 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nub1P54729 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15.74■□□□□ 0.11
Nub1P54729 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nub1P54729 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.74■□□□□ 0.11
Nub1P54729 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nub1P54729 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Nub1P54729 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nub1P54729 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nub1P54729 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.74■□□□□ 0.11
Nub1P54729 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nub1P54729 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nub1P54729 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.74■□□□□ 0.11
Nub1P54729 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.74■□□□□ 0.11
Nub1P54729 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.74■□□□□ 0.11
Nub1P54729 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nub1P54729 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Nub1P54729 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nub1P54729 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Nub1P54729 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Nub1P54729 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nub1P54729 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nub1P54729 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Nub1P54729 Gm5648-201ENSMUST00000122244 1587 ntBASIC15.74■□□□□ 0.11
Nub1P54729 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nub1P54729 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nub1P54729 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nub1P54729 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Nub1P54729 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nub1P54729 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nub1P54729 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nub1P54729 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Nub1P54729 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nub1P54729 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nub1P54729 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nub1P54729 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nub1P54729 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Nub1P54729 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Nub1P54729 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Nub1P54729 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.73■□□□□ 0.11
Nub1P54729 Gm8749-201ENSMUST00000117737 331 ntBASIC15.73■□□□□ 0.11
Nub1P54729 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.73■□□□□ 0.11
Nub1P54729 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nub1P54729 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC15.73■□□□□ 0.11
Nub1P54729 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Nub1P54729 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nub1P54729 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Nub1P54729 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nub1P54729 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.73■□□□□ 0.11
Nub1P54729 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Nub1P54729 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nub1P54729 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nub1P54729 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Nub1P54729 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nub1P54729 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nub1P54729 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nub1P54729 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nub1P54729 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Nub1P54729 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nub1P54729 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.73■□□□□ 0.11
Nub1P54729 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nub1P54729 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nub1P54729 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Nub1P54729 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nub1P54729 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nub1P54729 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Nub1P54729 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nub1P54729 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nub1P54729 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Nub1P54729 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Nub1P54729 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nub1P54729 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nub1P54729 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nub1P54729 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Nub1P54729 Gm14822-201ENSMUST00000122247 291 ntBASIC15.72■□□□□ 0.11
Nub1P54729 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.72■□□□□ 0.11
Nub1P54729 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Nub1P54729 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.72■□□□□ 0.11
Nub1P54729 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms