Protein–RNA interactions for Protein: P48759

Ptx3, Pentraxin-related protein PTX3, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptx3P48759 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.61□□□□□ -0.23
Ptx3P48759 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ptx3P48759 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ptx3P48759 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ptx3P48759 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ptx3P48759 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.6□□□□□ -0.23
Ptx3P48759 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ptx3P48759 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ptx3P48759 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ptx3P48759 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ptx3P48759 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ptx3P48759 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ptx3P48759 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ptx3P48759 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
Ptx3P48759 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.6□□□□□ -0.23
Ptx3P48759 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Ptx3P48759 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ptx3P48759 Gm15693-201ENSMUST00000120470 637 ntBASIC13.6□□□□□ -0.23
Ptx3P48759 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ptx3P48759 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ptx3P48759 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.6□□□□□ -0.23
Ptx3P48759 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ptx3P48759 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Ptx3P48759 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ptx3P48759 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.6□□□□□ -0.23
Ptx3P48759 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.6□□□□□ -0.23
Ptx3P48759 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.6□□□□□ -0.23
Ptx3P48759 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ptx3P48759 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ptx3P48759 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ptx3P48759 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Ptx3P48759 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ptx3P48759 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ptx3P48759 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
Ptx3P48759 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ptx3P48759 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ptx3P48759 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ptx3P48759 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ptx3P48759 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ptx3P48759 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ptx3P48759 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ptx3P48759 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ptx3P48759 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Ptx3P48759 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ptx3P48759 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ptx3P48759 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Ptx3P48759 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ptx3P48759 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ptx3P48759 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Ptx3P48759 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.59□□□□□ -0.23
Ptx3P48759 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Ptx3P48759 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ptx3P48759 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ptx3P48759 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.59□□□□□ -0.23
Ptx3P48759 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ptx3P48759 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ptx3P48759 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ptx3P48759 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ptx3P48759 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ptx3P48759 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ptx3P48759 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ptx3P48759 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.59□□□□□ -0.23
Ptx3P48759 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ptx3P48759 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.59□□□□□ -0.23
Ptx3P48759 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Ptx3P48759 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ptx3P48759 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.59□□□□□ -0.23
Ptx3P48759 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ptx3P48759 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ptx3P48759 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ptx3P48759 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ptx3P48759 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.58□□□□□ -0.23
Ptx3P48759 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.23
Ptx3P48759 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Ptx3P48759 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Ptx3P48759 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Ptx3P48759 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ptx3P48759 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ptx3P48759 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ptx3P48759 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ptx3P48759 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ptx3P48759 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ptx3P48759 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ptx3P48759 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ptx3P48759 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ptx3P48759 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.58□□□□□ -0.24
Ptx3P48759 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ptx3P48759 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ptx3P48759 Gm5479-201ENSMUST00000160578 435 ntBASIC13.58□□□□□ -0.24
Ptx3P48759 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.58□□□□□ -0.24
Ptx3P48759 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Ptx3P48759 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ptx3P48759 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.58□□□□□ -0.24
Ptx3P48759 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.58□□□□□ -0.24
Ptx3P48759 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.58□□□□□ -0.24
Ptx3P48759 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ptx3P48759 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Ptx3P48759 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.58□□□□□ -0.24
Ptx3P48759 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ptx3P48759 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms