Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Hmx3P42581 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Hmx3P42581 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Hmx3P42581 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.27□□□□□ -0.45
Hmx3P42581 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Hmx3P42581 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmx3P42581 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hmx3P42581 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmx3P42581 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Hmx3P42581 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmx3P42581 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hmx3P42581 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmx3P42581 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmx3P42581 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hmx3P42581 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmx3P42581 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Hmx3P42581 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.26□□□□□ -0.45
Hmx3P42581 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.26□□□□□ -0.45
Hmx3P42581 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmx3P42581 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmx3P42581 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmx3P42581 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmx3P42581 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Hmx3P42581 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmx3P42581 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Hmx3P42581 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmx3P42581 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmx3P42581 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Hmx3P42581 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Hmx3P42581 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmx3P42581 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmx3P42581 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Hmx3P42581 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Hmx3P42581 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hmx3P42581 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hmx3P42581 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmx3P42581 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hmx3P42581 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmx3P42581 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmx3P42581 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmx3P42581 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmx3P42581 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmx3P42581 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Hmx3P42581 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmx3P42581 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmx3P42581 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Hmx3P42581 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.26□□□□□ -0.45
Hmx3P42581 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmx3P42581 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Hmx3P42581 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmx3P42581 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmx3P42581 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.26□□□□□ -0.45
Hmx3P42581 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.26□□□□□ -0.45
Hmx3P42581 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hmx3P42581 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmx3P42581 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hmx3P42581 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hmx3P42581 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmx3P42581 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Hmx3P42581 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmx3P42581 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmx3P42581 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmx3P42581 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmx3P42581 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hmx3P42581 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmx3P42581 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmx3P42581 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Hmx3P42581 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmx3P42581 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Hmx3P42581 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmx3P42581 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmx3P42581 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmx3P42581 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Hmx3P42581 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmx3P42581 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmx3P42581 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC12.25□□□□□ -0.45
Hmx3P42581 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hmx3P42581 Gm27867-201ENSMUST00000184778 125 ntBASIC12.25□□□□□ -0.45
Hmx3P42581 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmx3P42581 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmx3P42581 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmx3P42581 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmx3P42581 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmx3P42581 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmx3P42581 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Hmx3P42581 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Hmx3P42581 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmx3P42581 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC12.25□□□□□ -0.45
Hmx3P42581 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmx3P42581 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Hmx3P42581 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Hmx3P42581 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.25□□□□□ -0.45
Hmx3P42581 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Hmx3P42581 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Hmx3P42581 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.25□□□□□ -0.45
Hmx3P42581 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.25□□□□□ -0.45
Hmx3P42581 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmx3P42581 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmx3P42581 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Hmx3P42581 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms