Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Upk2P38575 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Upk2P38575 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Upk2P38575 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk2P38575 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk2P38575 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Upk2P38575 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.84□□□□□ -0.35
Upk2P38575 Rpph1-201ENSMUST00000175096 319 ntBASIC12.84□□□□□ -0.35
Upk2P38575 Mir3113-201ENSMUST00000175478 76 ntBASIC12.84□□□□□ -0.35
Upk2P38575 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk2P38575 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.84□□□□□ -0.35
Upk2P38575 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Upk2P38575 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk2P38575 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC12.84□□□□□ -0.35
Upk2P38575 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk2P38575 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk2P38575 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Upk2P38575 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk2P38575 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk2P38575 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Upk2P38575 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk2P38575 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.84□□□□□ -0.35
Upk2P38575 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk2P38575 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk2P38575 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk2P38575 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.84□□□□□ -0.35
Upk2P38575 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk2P38575 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk2P38575 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.35
Upk2P38575 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Upk2P38575 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Upk2P38575 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.83□□□□□ -0.35
Upk2P38575 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Upk2P38575 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Upk2P38575 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Upk2P38575 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk2P38575 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk2P38575 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk2P38575 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk2P38575 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.83□□□□□ -0.36
Upk2P38575 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk2P38575 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk2P38575 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk2P38575 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Upk2P38575 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Upk2P38575 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.83□□□□□ -0.36
Upk2P38575 Gm15427-201ENSMUST00000117288 531 ntBASIC12.83□□□□□ -0.36
Upk2P38575 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.83□□□□□ -0.36
Upk2P38575 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.83□□□□□ -0.36
Upk2P38575 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.83□□□□□ -0.36
Upk2P38575 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.83□□□□□ -0.36
Upk2P38575 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk2P38575 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk2P38575 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Upk2P38575 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Upk2P38575 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Upk2P38575 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk2P38575 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk2P38575 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk2P38575 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk2P38575 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.83□□□□□ -0.36
Upk2P38575 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk2P38575 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk2P38575 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Upk2P38575 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk2P38575 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk2P38575 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Upk2P38575 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk2P38575 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Upk2P38575 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Upk2P38575 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk2P38575 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Upk2P38575 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk2P38575 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Upk2P38575 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk2P38575 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Upk2P38575 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk2P38575 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk2P38575 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk2P38575 Gm14042-201ENSMUST00000120139 833 ntBASIC12.82□□□□□ -0.36
Upk2P38575 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC12.82□□□□□ -0.36
Upk2P38575 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.82□□□□□ -0.36
Upk2P38575 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.82□□□□□ -0.36
Upk2P38575 Gm44771-201ENSMUST00000206975 626 ntBASIC12.82□□□□□ -0.36
Upk2P38575 Gm45098-201ENSMUST00000207179 657 ntBASIC12.82□□□□□ -0.36
Upk2P38575 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk2P38575 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Upk2P38575 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk2P38575 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk2P38575 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk2P38575 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk2P38575 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk2P38575 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk2P38575 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk2P38575 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk2P38575 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk2P38575 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Upk2P38575 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk2P38575 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Upk2P38575 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms