Protein–RNA interactions for Protein: P33622

Apoc3, Apolipoprotein C-III, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apoc3P33622 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Apoc3P33622 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Apoc3P33622 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Apoc3P33622 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Apoc3P33622 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Apoc3P33622 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Apoc3P33622 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Apoc3P33622 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.43□□□□□ -0.42
Apoc3P33622 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Apoc3P33622 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.43□□□□□ -0.42
Apoc3P33622 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Apoc3P33622 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Apoc3P33622 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC12.43□□□□□ -0.42
Apoc3P33622 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Apoc3P33622 Gm27454-201ENSMUST00000185090 204 ntBASIC12.43□□□□□ -0.42
Apoc3P33622 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.43□□□□□ -0.42
Apoc3P33622 Gm2559-201ENSMUST00000201323 363 ntBASIC12.43□□□□□ -0.42
Apoc3P33622 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Apoc3P33622 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC12.43□□□□□ -0.42
Apoc3P33622 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Apoc3P33622 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Apoc3P33622 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Apoc3P33622 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Apoc3P33622 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Apoc3P33622 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.43□□□□□ -0.42
Apoc3P33622 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Apoc3P33622 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Apoc3P33622 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Apoc3P33622 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Apoc3P33622 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Apoc3P33622 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Apoc3P33622 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Apoc3P33622 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Apoc3P33622 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Apoc3P33622 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Apoc3P33622 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Apoc3P33622 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Apoc3P33622 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Apoc3P33622 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Apoc3P33622 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Apoc3P33622 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.42□□□□□ -0.42
Apoc3P33622 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Apoc3P33622 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Apoc3P33622 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Apoc3P33622 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Apoc3P33622 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Apoc3P33622 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Apoc3P33622 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Apoc3P33622 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Apoc3P33622 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Apoc3P33622 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Apoc3P33622 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Apoc3P33622 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Apoc3P33622 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC12.42□□□□□ -0.42
Apoc3P33622 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Apoc3P33622 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Apoc3P33622 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Apoc3P33622 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.42□□□□□ -0.42
Apoc3P33622 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Apoc3P33622 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Apoc3P33622 Mir6404-201ENSMUST00000183699 94 ntBASIC12.42□□□□□ -0.42
Apoc3P33622 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Apoc3P33622 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Apoc3P33622 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC12.42□□□□□ -0.42
Apoc3P33622 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Apoc3P33622 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Apoc3P33622 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Apoc3P33622 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Apoc3P33622 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Apoc3P33622 Pck2-205ENSMUST00000226352 2784 ntBASIC12.42□□□□□ -0.42
Apoc3P33622 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Apoc3P33622 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Apoc3P33622 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Apoc3P33622 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Apoc3P33622 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Apoc3P33622 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Apoc3P33622 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.42□□□□□ -0.42
Apoc3P33622 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Apoc3P33622 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Apoc3P33622 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Apoc3P33622 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Apoc3P33622 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Apoc3P33622 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Apoc3P33622 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Apoc3P33622 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Apoc3P33622 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Apoc3P33622 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.41□□□□□ -0.42
Apoc3P33622 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Apoc3P33622 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Apoc3P33622 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Apoc3P33622 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Apoc3P33622 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC12.41□□□□□ -0.42
Apoc3P33622 Gm14722-201ENSMUST00000118943 689 ntBASIC12.41□□□□□ -0.42
Apoc3P33622 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Apoc3P33622 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC12.41□□□□□ -0.42
Apoc3P33622 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Apoc3P33622 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Apoc3P33622 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Apoc3P33622 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Apoc3P33622 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms