Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col8a2P25318 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col8a2P25318 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col8a2P25318 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col8a2P25318 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.23□□□□□ -0.45
Col8a2P25318 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Col8a2P25318 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col8a2P25318 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col8a2P25318 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.23□□□□□ -0.45
Col8a2P25318 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.23□□□□□ -0.45
Col8a2P25318 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col8a2P25318 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Col8a2P25318 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC12.23□□□□□ -0.45
Col8a2P25318 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC12.23□□□□□ -0.45
Col8a2P25318 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col8a2P25318 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col8a2P25318 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col8a2P25318 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col8a2P25318 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col8a2P25318 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col8a2P25318 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Col8a2P25318 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col8a2P25318 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col8a2P25318 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col8a2P25318 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col8a2P25318 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Col8a2P25318 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col8a2P25318 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Col8a2P25318 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.22□□□□□ -0.45
Col8a2P25318 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col8a2P25318 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col8a2P25318 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col8a2P25318 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.22□□□□□ -0.45
Col8a2P25318 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col8a2P25318 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.22□□□□□ -0.45
Col8a2P25318 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col8a2P25318 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Col8a2P25318 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.22□□□□□ -0.45
Col8a2P25318 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.22□□□□□ -0.45
Col8a2P25318 Gm10253-201ENSMUST00000194270 940 ntBASIC12.22□□□□□ -0.45
Col8a2P25318 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col8a2P25318 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.22□□□□□ -0.45
Col8a2P25318 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col8a2P25318 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col8a2P25318 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.22□□□□□ -0.45
Col8a2P25318 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.22□□□□□ -0.45
Col8a2P25318 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col8a2P25318 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col8a2P25318 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col8a2P25318 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col8a2P25318 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col8a2P25318 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col8a2P25318 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col8a2P25318 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col8a2P25318 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col8a2P25318 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col8a2P25318 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.22□□□□□ -0.45
Col8a2P25318 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col8a2P25318 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col8a2P25318 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col8a2P25318 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Col8a2P25318 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Col8a2P25318 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col8a2P25318 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col8a2P25318 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Col8a2P25318 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col8a2P25318 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col8a2P25318 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col8a2P25318 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col8a2P25318 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.21□□□□□ -0.45
Col8a2P25318 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col8a2P25318 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Col8a2P25318 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Col8a2P25318 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.21□□□□□ -0.45
Col8a2P25318 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Col8a2P25318 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.21□□□□□ -0.45
Col8a2P25318 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.21□□□□□ -0.45
Col8a2P25318 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col8a2P25318 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col8a2P25318 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
Col8a2P25318 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col8a2P25318 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col8a2P25318 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col8a2P25318 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.21□□□□□ -0.46
Col8a2P25318 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col8a2P25318 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col8a2P25318 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col8a2P25318 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col8a2P25318 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col8a2P25318 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col8a2P25318 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.2□□□□□ -0.46
Col8a2P25318 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col8a2P25318 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col8a2P25318 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Col8a2P25318 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col8a2P25318 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.2□□□□□ -0.46
Col8a2P25318 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col8a2P25318 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col8a2P25318 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col8a2P25318 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms