Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
BdnfP21237 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BdnfP21237 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
BdnfP21237 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.05□□□□□ -0.16
BdnfP21237 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.05□□□□□ -0.16
BdnfP21237 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BdnfP21237 Gm18489-201ENSMUST00000172565 551 ntBASIC14.05□□□□□ -0.16
BdnfP21237 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BdnfP21237 Gm17971-201ENSMUST00000190239 806 ntBASIC14.05□□□□□ -0.16
BdnfP21237 Gm37153-201ENSMUST00000193637 231 ntBASIC14.05□□□□□ -0.16
BdnfP21237 Gm9682-201ENSMUST00000197505 556 ntBASIC14.05□□□□□ -0.16
BdnfP21237 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.05□□□□□ -0.16
BdnfP21237 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.05□□□□□ -0.16
BdnfP21237 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.05□□□□□ -0.16
BdnfP21237 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.05□□□□□ -0.16
BdnfP21237 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
BdnfP21237 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BdnfP21237 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BdnfP21237 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
BdnfP21237 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BdnfP21237 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BdnfP21237 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BdnfP21237 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
BdnfP21237 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
BdnfP21237 Gm38273-201ENSMUST00000194987 2382 ntBASIC14.05□□□□□ -0.16
BdnfP21237 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.05□□□□□ -0.16
BdnfP21237 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.05□□□□□ -0.16
BdnfP21237 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BdnfP21237 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.05□□□□□ -0.16
BdnfP21237 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BdnfP21237 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
BdnfP21237 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
BdnfP21237 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BdnfP21237 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
BdnfP21237 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
BdnfP21237 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BdnfP21237 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
BdnfP21237 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BdnfP21237 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
BdnfP21237 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
BdnfP21237 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BdnfP21237 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
BdnfP21237 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.04□□□□□ -0.16
BdnfP21237 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
BdnfP21237 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
BdnfP21237 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
BdnfP21237 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
BdnfP21237 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
BdnfP21237 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BdnfP21237 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
BdnfP21237 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
BdnfP21237 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BdnfP21237 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BdnfP21237 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
BdnfP21237 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BdnfP21237 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.04□□□□□ -0.16
BdnfP21237 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BdnfP21237 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
BdnfP21237 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
BdnfP21237 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BdnfP21237 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.03□□□□□ -0.16
BdnfP21237 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.03□□□□□ -0.16
BdnfP21237 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BdnfP21237 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
BdnfP21237 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
BdnfP21237 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BdnfP21237 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
BdnfP21237 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
BdnfP21237 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
BdnfP21237 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
BdnfP21237 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
BdnfP21237 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.03□□□□□ -0.16
BdnfP21237 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.03□□□□□ -0.16
BdnfP21237 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BdnfP21237 Rps4l-201ENSMUST00000071745 943 ntBASIC14.03□□□□□ -0.16
BdnfP21237 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
BdnfP21237 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
BdnfP21237 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
BdnfP21237 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.03□□□□□ -0.16
BdnfP21237 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BdnfP21237 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
BdnfP21237 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
BdnfP21237 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.03□□□□□ -0.16
BdnfP21237 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.03□□□□□ -0.16
BdnfP21237 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BdnfP21237 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
BdnfP21237 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BdnfP21237 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BdnfP21237 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
BdnfP21237 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
BdnfP21237 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
BdnfP21237 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
BdnfP21237 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
BdnfP21237 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
BdnfP21237 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
BdnfP21237 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
BdnfP21237 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
BdnfP21237 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
BdnfP21237 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
BdnfP21237 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms