Protein–RNA interactions for Protein: P04212

T-cell receptor beta chain V region LB2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04212 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P04212 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P04212 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC11.91□□□□□ -0.5
P04212 CT010506.4-201ENSMUST00000225457 351 ntBASIC11.91□□□□□ -0.5
P04212 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC11.91□□□□□ -0.5
P04212 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P04212 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
P04212 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
P04212 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC11.91□□□□□ -0.5
P04212 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P04212 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P04212 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
P04212 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P04212 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
P04212 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
P04212 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
P04212 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P04212 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
P04212 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
P04212 AC130669.1-201ENSMUST00000228537 1672 ntBASIC11.91□□□□□ -0.5
P04212 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
P04212 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P04212 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P04212 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
P04212 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
P04212 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P04212 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
P04212 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P04212 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
P04212 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC11.9□□□□□ -0.5
P04212 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
P04212 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
P04212 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
P04212 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
P04212 Nupl1-207ENSMUST00000225311 2475 ntBASIC11.9□□□□□ -0.5
P04212 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P04212 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
P04212 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
P04212 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
P04212 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P04212 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
P04212 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P04212 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P04212 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
P04212 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
P04212 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P04212 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P04212 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
P04212 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P04212 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
P04212 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC11.9□□□□□ -0.51
P04212 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC11.9□□□□□ -0.51
P04212 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.51
P04212 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04212 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
P04212 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04212 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04212 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04212 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
P04212 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04212 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04212 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
P04212 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
P04212 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04212 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC11.89□□□□□ -0.51
P04212 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC11.89□□□□□ -0.51
P04212 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC11.89□□□□□ -0.51
P04212 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC11.89□□□□□ -0.51
P04212 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC11.89□□□□□ -0.51
P04212 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC11.89□□□□□ -0.51
P04212 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
P04212 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC11.89□□□□□ -0.51
P04212 Gm17971-201ENSMUST00000190239 806 ntBASIC11.89□□□□□ -0.51
P04212 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
P04212 Gm18246-201ENSMUST00000221023 728 ntBASIC11.89□□□□□ -0.51
P04212 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04212 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04212 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
P04212 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
P04212 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
P04212 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
P04212 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04212 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04212 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04212 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
P04212 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04212 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04212 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04212 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC11.89□□□□□ -0.51
P04212 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04212 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P04212 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
P04212 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
P04212 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
P04212 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P04212 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
P04212 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
P04212 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
P04212 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P04212 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms