Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC10.71□□□□□ -0.69
TcraP01849 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
TcraP01849 CT009713.7-201ENSMUST00000224689 571 ntBASIC10.71□□□□□ -0.69
TcraP01849 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
TcraP01849 Ankra2-208ENSMUST00000226100 1476 ntBASIC10.71□□□□□ -0.69
TcraP01849 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
TcraP01849 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
TcraP01849 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
TcraP01849 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
TcraP01849 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
TcraP01849 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
TcraP01849 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
TcraP01849 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
TcraP01849 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
TcraP01849 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
TcraP01849 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
TcraP01849 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
TcraP01849 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
TcraP01849 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
TcraP01849 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
TcraP01849 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
TcraP01849 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
TcraP01849 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC10.7□□□□□ -0.7
TcraP01849 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC10.7□□□□□ -0.7
TcraP01849 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
TcraP01849 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
TcraP01849 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
TcraP01849 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
TcraP01849 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
TcraP01849 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
TcraP01849 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
TcraP01849 Ntrk2-208ENSMUST00000225583 2719 ntBASIC10.7□□□□□ -0.7
TcraP01849 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
TcraP01849 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC10.7□□□□□ -0.7
TcraP01849 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC10.7□□□□□ -0.7
TcraP01849 AC121577.1-201ENSMUST00000227302 707 ntBASIC10.7□□□□□ -0.7
TcraP01849 AC114585.2-202ENSMUST00000228094 426 ntBASIC10.7□□□□□ -0.7
TcraP01849 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
TcraP01849 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
TcraP01849 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
TcraP01849 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
TcraP01849 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
TcraP01849 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
TcraP01849 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
TcraP01849 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
TcraP01849 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
TcraP01849 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
TcraP01849 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
TcraP01849 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
TcraP01849 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
TcraP01849 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
TcraP01849 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
TcraP01849 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
TcraP01849 Gm43364-201ENSMUST00000196046 3274 ntBASIC10.69□□□□□ -0.7
TcraP01849 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
TcraP01849 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
TcraP01849 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC10.69□□□□□ -0.7
TcraP01849 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
TcraP01849 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
TcraP01849 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
TcraP01849 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
TcraP01849 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
TcraP01849 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
TcraP01849 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
TcraP01849 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
TcraP01849 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
TcraP01849 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC10.69□□□□□ -0.7
TcraP01849 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
TcraP01849 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
TcraP01849 Gm25016-201ENSMUST00000158399 131 ntBASIC10.69□□□□□ -0.7
TcraP01849 Gm10231-201ENSMUST00000181584 441 ntBASIC10.69□□□□□ -0.7
TcraP01849 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
TcraP01849 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
TcraP01849 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
TcraP01849 Gm10175-202ENSMUST00000208752 441 ntBASIC10.69□□□□□ -0.7
TcraP01849 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
TcraP01849 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
TcraP01849 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
TcraP01849 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
TcraP01849 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
TcraP01849 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
TcraP01849 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC10.69□□□□□ -0.7
TcraP01849 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
TcraP01849 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
TcraP01849 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
TcraP01849 Gm43195-201ENSMUST00000200614 2332 ntBASIC10.69□□□□□ -0.7
TcraP01849 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
TcraP01849 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC10.69□□□□□ -0.7
TcraP01849 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
TcraP01849 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
TcraP01849 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
TcraP01849 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
TcraP01849 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
TcraP01849 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
TcraP01849 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
TcraP01849 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
TcraP01849 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
TcraP01849 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
TcraP01849 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
TcraP01849 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms