Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Igh-VJ558P01758 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Igh-VJ558P01758 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Igh-VJ558P01758 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Igh-VJ558P01758 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Igh-VJ558P01758 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.66□□□□□ -0.38
Igh-VJ558P01758 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Igh-VJ558P01758 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Igh-VJ558P01758 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Igh-VJ558P01758 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Igh-VJ558P01758 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igh-VJ558P01758 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igh-VJ558P01758 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igh-VJ558P01758 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igh-VJ558P01758 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igh-VJ558P01758 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igh-VJ558P01758 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igh-VJ558P01758 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igh-VJ558P01758 Gm11779-201ENSMUST00000118541 368 ntBASIC12.65□□□□□ -0.38
Igh-VJ558P01758 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Igh-VJ558P01758 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.65□□□□□ -0.38
Igh-VJ558P01758 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.65□□□□□ -0.38
Igh-VJ558P01758 Gm18206-201ENSMUST00000207027 926 ntBASIC12.65□□□□□ -0.38
Igh-VJ558P01758 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igh-VJ558P01758 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.65□□□□□ -0.38
Igh-VJ558P01758 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Igh-VJ558P01758 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Igh-VJ558P01758 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igh-VJ558P01758 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igh-VJ558P01758 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igh-VJ558P01758 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igh-VJ558P01758 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igh-VJ558P01758 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igh-VJ558P01758 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igh-VJ558P01758 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igh-VJ558P01758 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Igh-VJ558P01758 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.65□□□□□ -0.38
Igh-VJ558P01758 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igh-VJ558P01758 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igh-VJ558P01758 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Igh-VJ558P01758 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igh-VJ558P01758 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Igh-VJ558P01758 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.65□□□□□ -0.39
Igh-VJ558P01758 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Igh-VJ558P01758 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Igh-VJ558P01758 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igh-VJ558P01758 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igh-VJ558P01758 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Igh-VJ558P01758 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igh-VJ558P01758 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Igh-VJ558P01758 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igh-VJ558P01758 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igh-VJ558P01758 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igh-VJ558P01758 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.64□□□□□ -0.39
Igh-VJ558P01758 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igh-VJ558P01758 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igh-VJ558P01758 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Igh-VJ558P01758 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Igh-VJ558P01758 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igh-VJ558P01758 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igh-VJ558P01758 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Igh-VJ558P01758 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Igh-VJ558P01758 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.64□□□□□ -0.39
Igh-VJ558P01758 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Igh-VJ558P01758 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Igh-VJ558P01758 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Igh-VJ558P01758 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.64□□□□□ -0.39
Igh-VJ558P01758 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.64□□□□□ -0.39
Igh-VJ558P01758 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igh-VJ558P01758 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igh-VJ558P01758 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igh-VJ558P01758 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Igh-VJ558P01758 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igh-VJ558P01758 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.64□□□□□ -0.39
Igh-VJ558P01758 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igh-VJ558P01758 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Igh-VJ558P01758 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igh-VJ558P01758 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Igh-VJ558P01758 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Igh-VJ558P01758 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Igh-VJ558P01758 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Igh-VJ558P01758 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Igh-VJ558P01758 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.63□□□□□ -0.39
Igh-VJ558P01758 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Igh-VJ558P01758 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Igh-VJ558P01758 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Igh-VJ558P01758 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Igh-VJ558P01758 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Igh-VJ558P01758 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Igh-VJ558P01758 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Igh-VJ558P01758 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Igh-VJ558P01758 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Igh-VJ558P01758 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.63□□□□□ -0.39
Igh-VJ558P01758 Gm27920-201ENSMUST00000183953 96 ntBASIC12.63□□□□□ -0.39
Igh-VJ558P01758 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.63□□□□□ -0.39
Igh-VJ558P01758 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Igh-VJ558P01758 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.63□□□□□ -0.39
Igh-VJ558P01758 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Igh-VJ558P01758 Gm10175-201ENSMUST00000086013 645 ntBASIC12.63□□□□□ -0.39
Igh-VJ558P01758 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms