Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Vti1aO89116 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Vti1aO89116 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Vti1aO89116 Gm27618-201ENSMUST00000183671 60 ntBASIC15.78■□□□□ 0.12
Vti1aO89116 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.78■□□□□ 0.12
Vti1aO89116 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Vti1aO89116 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.78■□□□□ 0.12
Vti1aO89116 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Vti1aO89116 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vti1aO89116 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Vti1aO89116 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vti1aO89116 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.78■□□□□ 0.12
Vti1aO89116 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vti1aO89116 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Vti1aO89116 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.78■□□□□ 0.12
Vti1aO89116 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vti1aO89116 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vti1aO89116 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vti1aO89116 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Vti1aO89116 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vti1aO89116 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Vti1aO89116 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.77■□□□□ 0.12
Vti1aO89116 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vti1aO89116 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.77■□□□□ 0.12
Vti1aO89116 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vti1aO89116 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vti1aO89116 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vti1aO89116 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vti1aO89116 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vti1aO89116 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vti1aO89116 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vti1aO89116 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vti1aO89116 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Vti1aO89116 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Vti1aO89116 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Vti1aO89116 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vti1aO89116 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vti1aO89116 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC15.77■□□□□ 0.12
Vti1aO89116 Arhgef33-209ENSMUST00000225223 714 ntBASIC15.77■□□□□ 0.12
Vti1aO89116 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vti1aO89116 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vti1aO89116 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Vti1aO89116 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vti1aO89116 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vti1aO89116 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Vti1aO89116 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vti1aO89116 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vti1aO89116 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vti1aO89116 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Vti1aO89116 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.77■□□□□ 0.11
Vti1aO89116 Celf4-206ENSMUST00000224553 1729 ntBASIC15.77■□□□□ 0.11
Vti1aO89116 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Vti1aO89116 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vti1aO89116 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Vti1aO89116 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vti1aO89116 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vti1aO89116 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vti1aO89116 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vti1aO89116 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vti1aO89116 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vti1aO89116 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vti1aO89116 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Vti1aO89116 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Vti1aO89116 Gm27989-201ENSMUST00000184721 107 ntBASIC15.76■□□□□ 0.11
Vti1aO89116 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.76■□□□□ 0.11
Vti1aO89116 AC125206.2-201ENSMUST00000217454 574 ntBASIC15.76■□□□□ 0.11
Vti1aO89116 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.76■□□□□ 0.11
Vti1aO89116 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vti1aO89116 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vti1aO89116 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Vti1aO89116 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.76■□□□□ 0.11
Vti1aO89116 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Vti1aO89116 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vti1aO89116 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vti1aO89116 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vti1aO89116 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
Vti1aO89116 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vti1aO89116 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vti1aO89116 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vti1aO89116 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Vti1aO89116 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vti1aO89116 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.75■□□□□ 0.11
Vti1aO89116 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.75■□□□□ 0.11
Vti1aO89116 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.75■□□□□ 0.11
Vti1aO89116 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vti1aO89116 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC15.75■□□□□ 0.11
Vti1aO89116 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.75■□□□□ 0.11
Vti1aO89116 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Vti1aO89116 Gm38294-201ENSMUST00000192831 381 ntBASIC15.75■□□□□ 0.11
Vti1aO89116 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vti1aO89116 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Vti1aO89116 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.75■□□□□ 0.11
Vti1aO89116 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Vti1aO89116 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.75■□□□□ 0.11
Vti1aO89116 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vti1aO89116 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vti1aO89116 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Vti1aO89116 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15.75■□□□□ 0.11
Vti1aO89116 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.75■□□□□ 0.11
Vti1aO89116 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms