Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hdac3O88895 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hdac3O88895 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hdac3O88895 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Hdac3O88895 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hdac3O88895 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hdac3O88895 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hdac3O88895 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Hdac3O88895 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Hdac3O88895 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Hdac3O88895 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hdac3O88895 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hdac3O88895 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hdac3O88895 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hdac3O88895 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hdac3O88895 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.12□□□□□ -0.31
Hdac3O88895 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Hdac3O88895 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.12□□□□□ -0.31
Hdac3O88895 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Hdac3O88895 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.12□□□□□ -0.31
Hdac3O88895 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hdac3O88895 Gm12350-201ENSMUST00000121208 462 ntBASIC13.12□□□□□ -0.31
Hdac3O88895 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.12□□□□□ -0.31
Hdac3O88895 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.12□□□□□ -0.31
Hdac3O88895 Gm23547-201ENSMUST00000158210 271 ntBASIC13.12□□□□□ -0.31
Hdac3O88895 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.12□□□□□ -0.31
Hdac3O88895 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.12□□□□□ -0.31
Hdac3O88895 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.12□□□□□ -0.31
Hdac3O88895 Gm45167-201ENSMUST00000208007 322 ntBASIC13.12□□□□□ -0.31
Hdac3O88895 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.12□□□□□ -0.31
Hdac3O88895 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.12□□□□□ -0.31
Hdac3O88895 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.12□□□□□ -0.31
Hdac3O88895 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hdac3O88895 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Hdac3O88895 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.12□□□□□ -0.31
Hdac3O88895 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hdac3O88895 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.12□□□□□ -0.31
Hdac3O88895 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.12□□□□□ -0.31
Hdac3O88895 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.12□□□□□ -0.31
Hdac3O88895 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hdac3O88895 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hdac3O88895 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Hdac3O88895 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Hdac3O88895 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hdac3O88895 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hdac3O88895 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Hdac3O88895 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.11□□□□□ -0.31
Hdac3O88895 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Hdac3O88895 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hdac3O88895 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hdac3O88895 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hdac3O88895 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hdac3O88895 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hdac3O88895 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hdac3O88895 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.11□□□□□ -0.31
Hdac3O88895 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hdac3O88895 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hdac3O88895 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Hdac3O88895 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hdac3O88895 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Hdac3O88895 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hdac3O88895 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hdac3O88895 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hdac3O88895 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Hdac3O88895 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hdac3O88895 Gm10499-201ENSMUST00000174094 934 ntBASIC13.11□□□□□ -0.31
Hdac3O88895 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hdac3O88895 Gm2651-201ENSMUST00000203560 838 ntBASIC13.11□□□□□ -0.31
Hdac3O88895 Mzt1-203ENSMUST00000227948 952 ntBASIC13.11□□□□□ -0.31
Hdac3O88895 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hdac3O88895 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hdac3O88895 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.11□□□□□ -0.31
Hdac3O88895 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hdac3O88895 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Hdac3O88895 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hdac3O88895 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.11□□□□□ -0.31
Hdac3O88895 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Hdac3O88895 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Hdac3O88895 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hdac3O88895 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Hdac3O88895 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hdac3O88895 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hdac3O88895 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hdac3O88895 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.11□□□□□ -0.31
Hdac3O88895 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hdac3O88895 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hdac3O88895 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Hdac3O88895 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hdac3O88895 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Hdac3O88895 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Hdac3O88895 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hdac3O88895 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hdac3O88895 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hdac3O88895 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Hdac3O88895 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Hdac3O88895 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hdac3O88895 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Hdac3O88895 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.1□□□□□ -0.31
Hdac3O88895 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hdac3O88895 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms