Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn2O70591 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn2O70591 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Pfdn2O70591 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Pfdn2O70591 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn2O70591 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn2O70591 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn2O70591 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn2O70591 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Pfdn2O70591 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn2O70591 Gm13312-201ENSMUST00000119631 718 ntBASIC12.24□□□□□ -0.45
Pfdn2O70591 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn2O70591 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn2O70591 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn2O70591 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Pfdn2O70591 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn2O70591 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Pfdn2O70591 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn2O70591 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn2O70591 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.24□□□□□ -0.45
Pfdn2O70591 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC12.24□□□□□ -0.45
Pfdn2O70591 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn2O70591 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.24□□□□□ -0.45
Pfdn2O70591 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Pfdn2O70591 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.24□□□□□ -0.45
Pfdn2O70591 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.24□□□□□ -0.45
Pfdn2O70591 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC12.24□□□□□ -0.45
Pfdn2O70591 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn2O70591 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn2O70591 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn2O70591 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn2O70591 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn2O70591 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Pfdn2O70591 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn2O70591 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Pfdn2O70591 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn2O70591 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Pfdn2O70591 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.24□□□□□ -0.45
Pfdn2O70591 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn2O70591 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn2O70591 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn2O70591 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn2O70591 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn2O70591 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn2O70591 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn2O70591 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn2O70591 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn2O70591 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn2O70591 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn2O70591 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn2O70591 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn2O70591 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn2O70591 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn2O70591 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn2O70591 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Pfdn2O70591 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn2O70591 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn2O70591 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.23□□□□□ -0.45
Pfdn2O70591 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn2O70591 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Pfdn2O70591 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn2O70591 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC12.23□□□□□ -0.45
Pfdn2O70591 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn2O70591 Gm9172-201ENSMUST00000212092 954 ntBASIC12.23□□□□□ -0.45
Pfdn2O70591 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Pfdn2O70591 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn2O70591 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Pfdn2O70591 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn2O70591 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn2O70591 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn2O70591 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn2O70591 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn2O70591 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.23□□□□□ -0.45
Pfdn2O70591 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.23□□□□□ -0.45
Pfdn2O70591 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn2O70591 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn2O70591 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn2O70591 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Pfdn2O70591 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn2O70591 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn2O70591 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn2O70591 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn2O70591 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn2O70591 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn2O70591 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn2O70591 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Pfdn2O70591 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn2O70591 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn2O70591 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Pfdn2O70591 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn2O70591 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn2O70591 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn2O70591 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.22□□□□□ -0.45
Pfdn2O70591 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn2O70591 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn2O70591 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn2O70591 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn2O70591 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn2O70591 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.22□□□□□ -0.45
Pfdn2O70591 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms