Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
SncaO55042 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SncaO55042 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SncaO55042 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SncaO55042 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SncaO55042 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
SncaO55042 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
SncaO55042 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SncaO55042 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SncaO55042 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SncaO55042 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
SncaO55042 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
SncaO55042 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SncaO55042 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SncaO55042 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
SncaO55042 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
SncaO55042 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
SncaO55042 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SncaO55042 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SncaO55042 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SncaO55042 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SncaO55042 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
SncaO55042 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
SncaO55042 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SncaO55042 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SncaO55042 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SncaO55042 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SncaO55042 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SncaO55042 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.13□□□□□ -0.47
SncaO55042 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SncaO55042 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SncaO55042 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
SncaO55042 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SncaO55042 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.13□□□□□ -0.47
SncaO55042 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
SncaO55042 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SncaO55042 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SncaO55042 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
SncaO55042 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SncaO55042 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC12.13□□□□□ -0.47
SncaO55042 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SncaO55042 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC12.13□□□□□ -0.47
SncaO55042 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SncaO55042 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SncaO55042 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC12.13□□□□□ -0.47
SncaO55042 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC12.13□□□□□ -0.47
SncaO55042 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC12.13□□□□□ -0.47
SncaO55042 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC12.13□□□□□ -0.47
SncaO55042 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SncaO55042 AC159301.1-201ENSMUST00000225130 1182 ntBASIC12.13□□□□□ -0.47
SncaO55042 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SncaO55042 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SncaO55042 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
SncaO55042 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SncaO55042 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SncaO55042 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SncaO55042 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
SncaO55042 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SncaO55042 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
SncaO55042 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
SncaO55042 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SncaO55042 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SncaO55042 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SncaO55042 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
SncaO55042 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
SncaO55042 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SncaO55042 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SncaO55042 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SncaO55042 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
SncaO55042 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SncaO55042 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SncaO55042 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SncaO55042 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SncaO55042 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SncaO55042 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.12□□□□□ -0.47
SncaO55042 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SncaO55042 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
SncaO55042 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SncaO55042 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SncaO55042 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
SncaO55042 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SncaO55042 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SncaO55042 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
SncaO55042 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
SncaO55042 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SncaO55042 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12.12□□□□□ -0.47
SncaO55042 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC12.12□□□□□ -0.47
SncaO55042 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC12.12□□□□□ -0.47
SncaO55042 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC12.12□□□□□ -0.47
SncaO55042 Gm9682-201ENSMUST00000197505 556 ntBASIC12.12□□□□□ -0.47
SncaO55042 Gm6089-201ENSMUST00000197666 938 ntBASIC12.12□□□□□ -0.47
SncaO55042 AC159106.1-201ENSMUST00000224421 690 ntBASIC12.12□□□□□ -0.47
SncaO55042 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.12□□□□□ -0.47
SncaO55042 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SncaO55042 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SncaO55042 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SncaO55042 Spr-ps1-201ENSMUST00000089584 605 ntBASIC12.12□□□□□ -0.47
SncaO55042 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SncaO55042 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SncaO55042 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms