Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Matn3O35701 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Matn3O35701 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Matn3O35701 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Matn3O35701 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Matn3O35701 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.32□□□□□ -0.28
Matn3O35701 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Matn3O35701 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Matn3O35701 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Matn3O35701 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Matn3O35701 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Matn3O35701 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.32□□□□□ -0.28
Matn3O35701 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC13.32□□□□□ -0.28
Matn3O35701 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Matn3O35701 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.32□□□□□ -0.28
Matn3O35701 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Matn3O35701 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.32□□□□□ -0.28
Matn3O35701 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.32□□□□□ -0.28
Matn3O35701 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Matn3O35701 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Matn3O35701 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Matn3O35701 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Matn3O35701 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.32□□□□□ -0.28
Matn3O35701 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.32□□□□□ -0.28
Matn3O35701 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Matn3O35701 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Matn3O35701 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Matn3O35701 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Matn3O35701 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Matn3O35701 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Matn3O35701 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Matn3O35701 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Matn3O35701 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.32□□□□□ -0.28
Matn3O35701 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Matn3O35701 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Matn3O35701 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Matn3O35701 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Matn3O35701 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Matn3O35701 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Matn3O35701 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Matn3O35701 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.31□□□□□ -0.28
Matn3O35701 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Matn3O35701 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Matn3O35701 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Matn3O35701 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Matn3O35701 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Matn3O35701 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Matn3O35701 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Matn3O35701 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Matn3O35701 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Matn3O35701 Gm11950-201ENSMUST00000121615 838 ntBASIC13.31□□□□□ -0.28
Matn3O35701 Gm11860-201ENSMUST00000122346 1010 ntBASIC13.31□□□□□ -0.28
Matn3O35701 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Matn3O35701 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Matn3O35701 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Matn3O35701 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Matn3O35701 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.31□□□□□ -0.28
Matn3O35701 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Matn3O35701 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Matn3O35701 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Matn3O35701 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Matn3O35701 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Matn3O35701 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Matn3O35701 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Matn3O35701 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Matn3O35701 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Matn3O35701 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Matn3O35701 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Matn3O35701 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Matn3O35701 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Matn3O35701 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Matn3O35701 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Matn3O35701 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Matn3O35701 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Matn3O35701 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Matn3O35701 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Matn3O35701 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.3□□□□□ -0.28
Matn3O35701 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Matn3O35701 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Matn3O35701 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC13.3□□□□□ -0.28
Matn3O35701 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Matn3O35701 Gm8318-201ENSMUST00000182954 872 ntBASIC13.3□□□□□ -0.28
Matn3O35701 Gm28033-201ENSMUST00000184224 96 ntBASIC13.3□□□□□ -0.28
Matn3O35701 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Matn3O35701 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Matn3O35701 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Matn3O35701 Gm18669-201ENSMUST00000216049 778 ntBASIC13.3□□□□□ -0.28
Matn3O35701 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Matn3O35701 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Matn3O35701 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Matn3O35701 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Matn3O35701 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Matn3O35701 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Matn3O35701 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Matn3O35701 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Matn3O35701 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Matn3O35701 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Matn3O35701 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Matn3O35701 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Matn3O35701 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms