Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atf6bO35451 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.73□□□□□ -0.37
Atf6bO35451 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Atf6bO35451 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.73□□□□□ -0.37
Atf6bO35451 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atf6bO35451 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Atf6bO35451 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atf6bO35451 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Atf6bO35451 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atf6bO35451 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.73□□□□□ -0.37
Atf6bO35451 Gm25911-201ENSMUST00000157621 56 ntBASIC12.73□□□□□ -0.37
Atf6bO35451 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.73□□□□□ -0.37
Atf6bO35451 Gm27301-201ENSMUST00000184012 127 ntBASIC12.73□□□□□ -0.37
Atf6bO35451 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.73□□□□□ -0.37
Atf6bO35451 Gm37935-201ENSMUST00000192012 982 ntBASIC12.73□□□□□ -0.37
Atf6bO35451 Gm43073-201ENSMUST00000198200 1189 ntBASIC12.73□□□□□ -0.37
Atf6bO35451 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.73□□□□□ -0.37
Atf6bO35451 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.73□□□□□ -0.37
Atf6bO35451 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Atf6bO35451 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atf6bO35451 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atf6bO35451 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atf6bO35451 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Atf6bO35451 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atf6bO35451 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Atf6bO35451 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atf6bO35451 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.73□□□□□ -0.37
Atf6bO35451 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.73□□□□□ -0.37
Atf6bO35451 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atf6bO35451 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Atf6bO35451 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atf6bO35451 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atf6bO35451 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Atf6bO35451 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Atf6bO35451 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atf6bO35451 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Atf6bO35451 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Atf6bO35451 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atf6bO35451 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atf6bO35451 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Atf6bO35451 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.72□□□□□ -0.37
Atf6bO35451 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Atf6bO35451 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atf6bO35451 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atf6bO35451 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Atf6bO35451 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atf6bO35451 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atf6bO35451 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atf6bO35451 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atf6bO35451 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.72□□□□□ -0.37
Atf6bO35451 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.72□□□□□ -0.37
Atf6bO35451 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Atf6bO35451 Gm2272-201ENSMUST00000194903 582 ntBASIC12.72□□□□□ -0.37
Atf6bO35451 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.72□□□□□ -0.37
Atf6bO35451 AC225888.1-201ENSMUST00000227184 728 ntBASIC12.72□□□□□ -0.37
Atf6bO35451 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atf6bO35451 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atf6bO35451 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atf6bO35451 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atf6bO35451 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atf6bO35451 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atf6bO35451 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atf6bO35451 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atf6bO35451 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atf6bO35451 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atf6bO35451 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Atf6bO35451 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Atf6bO35451 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Atf6bO35451 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Atf6bO35451 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Atf6bO35451 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Atf6bO35451 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Atf6bO35451 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Atf6bO35451 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Atf6bO35451 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Atf6bO35451 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.71□□□□□ -0.37
Atf6bO35451 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Atf6bO35451 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.71□□□□□ -0.37
Atf6bO35451 Gm4913-201ENSMUST00000117075 1290 ntBASIC12.71□□□□□ -0.37
Atf6bO35451 Gm16198-201ENSMUST00000118766 670 ntBASIC12.71□□□□□ -0.37
Atf6bO35451 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.71□□□□□ -0.37
Atf6bO35451 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.71□□□□□ -0.37
Atf6bO35451 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC12.71□□□□□ -0.37
Atf6bO35451 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.71□□□□□ -0.37
Atf6bO35451 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Atf6bO35451 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Atf6bO35451 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.71□□□□□ -0.37
Atf6bO35451 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Atf6bO35451 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Atf6bO35451 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Atf6bO35451 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Atf6bO35451 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Atf6bO35451 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Atf6bO35451 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Atf6bO35451 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Atf6bO35451 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Atf6bO35451 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.38
Atf6bO35451 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.38
Atf6bO35451 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Atf6bO35451 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms