Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Chchd1-203ENSMUST00000224633 557 ntBASIC16.18■□□□□ 0.18
Pcdh11xF6ZNL5 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh11xF6ZNL5 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh11xF6ZNL5 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh11xF6ZNL5 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh11xF6ZNL5 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh11xF6ZNL5 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh11xF6ZNL5 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC16.17■□□□□ 0.18
Pcdh11xF6ZNL5 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.17■□□□□ 0.18
Pcdh11xF6ZNL5 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh11xF6ZNL5 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Pcdh11xF6ZNL5 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh11xF6ZNL5 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh11xF6ZNL5 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh11xF6ZNL5 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh11xF6ZNL5 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh11xF6ZNL5 Nupl1-207ENSMUST00000225311 2475 ntBASIC16.17■□□□□ 0.18
Pcdh11xF6ZNL5 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Pcdh11xF6ZNL5 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Pcdh11xF6ZNL5 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh11xF6ZNL5 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC16.17■□□□□ 0.18
Pcdh11xF6ZNL5 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh11xF6ZNL5 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh11xF6ZNL5 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh11xF6ZNL5 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Pcdh11xF6ZNL5 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Pcdh11xF6ZNL5 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC16.17■□□□□ 0.18
Pcdh11xF6ZNL5 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC16.17■□□□□ 0.18
Pcdh11xF6ZNL5 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC16.17■□□□□ 0.18
Pcdh11xF6ZNL5 Gm15483-201ENSMUST00000120338 456 ntBASIC16.17■□□□□ 0.18
Pcdh11xF6ZNL5 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC16.17■□□□□ 0.18
Pcdh11xF6ZNL5 Gm45098-201ENSMUST00000207179 657 ntBASIC16.17■□□□□ 0.18
Pcdh11xF6ZNL5 Gm9182-201ENSMUST00000217829 639 ntBASIC16.17■□□□□ 0.18
Pcdh11xF6ZNL5 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh11xF6ZNL5 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh11xF6ZNL5 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh11xF6ZNL5 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh11xF6ZNL5 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh11xF6ZNL5 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh11xF6ZNL5 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh11xF6ZNL5 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh11xF6ZNL5 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Pcdh11xF6ZNL5 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
Pcdh11xF6ZNL5 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh11xF6ZNL5 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh11xF6ZNL5 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC16.16■□□□□ 0.18
Pcdh11xF6ZNL5 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh11xF6ZNL5 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh11xF6ZNL5 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC16.16■□□□□ 0.18
Pcdh11xF6ZNL5 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC16.16■□□□□ 0.18
Pcdh11xF6ZNL5 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdh11xF6ZNL5 Gm5479-201ENSMUST00000160578 435 ntBASIC16.16■□□□□ 0.18
Pcdh11xF6ZNL5 Klk2-ps-201ENSMUST00000205342 571 ntBASIC16.16■□□□□ 0.18
Pcdh11xF6ZNL5 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh11xF6ZNL5 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh11xF6ZNL5 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh11xF6ZNL5 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh11xF6ZNL5 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh11xF6ZNL5 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh11xF6ZNL5 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh11xF6ZNL5 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh11xF6ZNL5 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh11xF6ZNL5 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh11xF6ZNL5 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh11xF6ZNL5 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh11xF6ZNL5 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh11xF6ZNL5 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC16.15■□□□□ 0.18
Pcdh11xF6ZNL5 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Pcdh11xF6ZNL5 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh11xF6ZNL5 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh11xF6ZNL5 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh11xF6ZNL5 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Pcdh11xF6ZNL5 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh11xF6ZNL5 Mir1895-201ENSMUST00000122615 79 ntBASIC16.15■□□□□ 0.18
Pcdh11xF6ZNL5 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Pcdh11xF6ZNL5 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh11xF6ZNL5 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh11xF6ZNL5 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh11xF6ZNL5 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh11xF6ZNL5 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh11xF6ZNL5 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh11xF6ZNL5 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh11xF6ZNL5 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh11xF6ZNL5 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh11xF6ZNL5 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh11xF6ZNL5 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh11xF6ZNL5 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Pcdh11xF6ZNL5 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh11xF6ZNL5 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh11xF6ZNL5 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh11xF6ZNL5 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh11xF6ZNL5 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh11xF6ZNL5 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh11xF6ZNL5 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh11xF6ZNL5 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh11xF6ZNL5 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh11xF6ZNL5 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh11xF6ZNL5 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh11xF6ZNL5 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Pcdh11xF6ZNL5 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms