Protein–RNA interactions for Protein: E9PX29

Sptbn4, Spectrin beta chain, mousemouse

Predictions only

Length 2,561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4E9PX29 Gm6916-202ENSMUST00000205523 195 ntBASIC13.03□□□□□ -0.32
Sptbn4E9PX29 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sptbn4E9PX29 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sptbn4E9PX29 Gm6082-201ENSMUST00000215204 454 ntBASIC13.03□□□□□ -0.32
Sptbn4E9PX29 Gm26596-201ENSMUST00000180464 2655 ntBASIC13.03□□□□□ -0.32
Sptbn4E9PX29 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Sptbn4E9PX29 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sptbn4E9PX29 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sptbn4E9PX29 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sptbn4E9PX29 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Sptbn4E9PX29 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sptbn4E9PX29 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sptbn4E9PX29 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.03□□□□□ -0.32
Sptbn4E9PX29 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sptbn4E9PX29 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Sptbn4E9PX29 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sptbn4E9PX29 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.03□□□□□ -0.32
Sptbn4E9PX29 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sptbn4E9PX29 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.03□□□□□ -0.32
Sptbn4E9PX29 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC13.03□□□□□ -0.32
Sptbn4E9PX29 Gm37230-201ENSMUST00000194491 818 ntBASIC13.03□□□□□ -0.32
Sptbn4E9PX29 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sptbn4E9PX29 Gm18935-201ENSMUST00000212692 664 ntBASIC13.03□□□□□ -0.32
Sptbn4E9PX29 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.03□□□□□ -0.32
Sptbn4E9PX29 CT030182.1-201ENSMUST00000225935 533 ntBASIC13.03□□□□□ -0.32
Sptbn4E9PX29 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sptbn4E9PX29 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sptbn4E9PX29 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sptbn4E9PX29 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sptbn4E9PX29 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sptbn4E9PX29 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sptbn4E9PX29 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sptbn4E9PX29 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sptbn4E9PX29 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Sptbn4E9PX29 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sptbn4E9PX29 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sptbn4E9PX29 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Sptbn4E9PX29 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sptbn4E9PX29 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sptbn4E9PX29 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sptbn4E9PX29 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.02□□□□□ -0.32
Sptbn4E9PX29 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sptbn4E9PX29 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.02□□□□□ -0.32
Sptbn4E9PX29 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Sptbn4E9PX29 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sptbn4E9PX29 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.02□□□□□ -0.32
Sptbn4E9PX29 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sptbn4E9PX29 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sptbn4E9PX29 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sptbn4E9PX29 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sptbn4E9PX29 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sptbn4E9PX29 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sptbn4E9PX29 Gm6015-201ENSMUST00000217493 1586 ntBASIC13.02□□□□□ -0.33
Sptbn4E9PX29 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC13.02□□□□□ -0.33
Sptbn4E9PX29 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sptbn4E9PX29 Gm14381-201ENSMUST00000122105 414 ntBASIC13.02□□□□□ -0.33
Sptbn4E9PX29 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sptbn4E9PX29 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sptbn4E9PX29 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sptbn4E9PX29 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC13.02□□□□□ -0.33
Sptbn4E9PX29 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Sptbn4E9PX29 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Sptbn4E9PX29 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sptbn4E9PX29 Gm6203-201ENSMUST00000209575 1342 ntBASIC13.02□□□□□ -0.33
Sptbn4E9PX29 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sptbn4E9PX29 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sptbn4E9PX29 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sptbn4E9PX29 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sptbn4E9PX29 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sptbn4E9PX29 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sptbn4E9PX29 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sptbn4E9PX29 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sptbn4E9PX29 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sptbn4E9PX29 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sptbn4E9PX29 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sptbn4E9PX29 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sptbn4E9PX29 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sptbn4E9PX29 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Sptbn4E9PX29 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Sptbn4E9PX29 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Sptbn4E9PX29 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Sptbn4E9PX29 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Sptbn4E9PX29 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Sptbn4E9PX29 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.01□□□□□ -0.33
Sptbn4E9PX29 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.01□□□□□ -0.33
Sptbn4E9PX29 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC13.01□□□□□ -0.33
Sptbn4E9PX29 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sptbn4E9PX29 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Sptbn4E9PX29 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Sptbn4E9PX29 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sptbn4E9PX29 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sptbn4E9PX29 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sptbn4E9PX29 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sptbn4E9PX29 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Sptbn4E9PX29 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sptbn4E9PX29 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sptbn4E9PX29 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sptbn4E9PX29 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.01□□□□□ -0.33
Sptbn4E9PX29 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sptbn4E9PX29 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms