Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cfap99A0A140LIX9 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cfap99A0A140LIX9 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cfap99A0A140LIX9 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC17.51■□□□□ 0.39
Cfap99A0A140LIX9 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cfap99A0A140LIX9 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cfap99A0A140LIX9 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cfap99A0A140LIX9 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cfap99A0A140LIX9 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cfap99A0A140LIX9 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cfap99A0A140LIX9 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cfap99A0A140LIX9 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cfap99A0A140LIX9 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cfap99A0A140LIX9 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.5■□□□□ 0.39
Cfap99A0A140LIX9 Gm13517-201ENSMUST00000120782 1495 ntBASIC17.5■□□□□ 0.39
Cfap99A0A140LIX9 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cfap99A0A140LIX9 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cfap99A0A140LIX9 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cfap99A0A140LIX9 Celf4-206ENSMUST00000224553 1729 ntBASIC17.5■□□□□ 0.39
Cfap99A0A140LIX9 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Cfap99A0A140LIX9 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cfap99A0A140LIX9 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cfap99A0A140LIX9 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Cfap99A0A140LIX9 Gm2810-201ENSMUST00000118681 990 ntBASIC17.5■□□□□ 0.39
Cfap99A0A140LIX9 Gm16026-204ENSMUST00000162652 683 ntBASIC17.5■□□□□ 0.39
Cfap99A0A140LIX9 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Cfap99A0A140LIX9 Gm5866-201ENSMUST00000177881 973 ntBASIC17.5■□□□□ 0.39
Cfap99A0A140LIX9 Gm9824-201ENSMUST00000178707 561 ntBASIC17.5■□□□□ 0.39
Cfap99A0A140LIX9 Gm38225-201ENSMUST00000194001 393 ntBASIC17.5■□□□□ 0.39
Cfap99A0A140LIX9 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Cfap99A0A140LIX9 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cfap99A0A140LIX9 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cfap99A0A140LIX9 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cfap99A0A140LIX9 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cfap99A0A140LIX9 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cfap99A0A140LIX9 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cfap99A0A140LIX9 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cfap99A0A140LIX9 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cfap99A0A140LIX9 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cfap99A0A140LIX9 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cfap99A0A140LIX9 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cfap99A0A140LIX9 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.49■□□□□ 0.39
Cfap99A0A140LIX9 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cfap99A0A140LIX9 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cfap99A0A140LIX9 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Cfap99A0A140LIX9 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Cfap99A0A140LIX9 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cfap99A0A140LIX9 Gm9768-201ENSMUST00000206007 2861 ntBASIC17.49■□□□□ 0.39
Cfap99A0A140LIX9 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.49■□□□□ 0.39
Cfap99A0A140LIX9 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cfap99A0A140LIX9 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC17.49■□□□□ 0.39
Cfap99A0A140LIX9 Gm6415-201ENSMUST00000118488 348 ntBASIC17.49■□□□□ 0.39
Cfap99A0A140LIX9 Gm27618-201ENSMUST00000183671 60 ntBASIC17.49■□□□□ 0.39
Cfap99A0A140LIX9 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cfap99A0A140LIX9 Gm37277-201ENSMUST00000194052 1111 ntBASIC17.49■□□□□ 0.39
Cfap99A0A140LIX9 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Cfap99A0A140LIX9 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cfap99A0A140LIX9 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cfap99A0A140LIX9 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cfap99A0A140LIX9 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cfap99A0A140LIX9 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cfap99A0A140LIX9 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Cfap99A0A140LIX9 Efs-202ENSMUST00000227037 2540 ntBASIC17.49■□□□□ 0.39
Cfap99A0A140LIX9 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Cfap99A0A140LIX9 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cfap99A0A140LIX9 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cfap99A0A140LIX9 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cfap99A0A140LIX9 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cfap99A0A140LIX9 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cfap99A0A140LIX9 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cfap99A0A140LIX9 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cfap99A0A140LIX9 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC17.48■□□□□ 0.39
Cfap99A0A140LIX9 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Cfap99A0A140LIX9 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Cfap99A0A140LIX9 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cfap99A0A140LIX9 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Cfap99A0A140LIX9 Gm27306-201ENSMUST00000183970 107 ntBASIC17.48■□□□□ 0.39
Cfap99A0A140LIX9 Gm17837-201ENSMUST00000186435 985 ntBASIC17.48■□□□□ 0.39
Cfap99A0A140LIX9 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC17.48■□□□□ 0.39
Cfap99A0A140LIX9 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cfap99A0A140LIX9 AC140375.2-201ENSMUST00000225283 584 ntBASIC17.48■□□□□ 0.39
Cfap99A0A140LIX9 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cfap99A0A140LIX9 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cfap99A0A140LIX9 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Cfap99A0A140LIX9 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cfap99A0A140LIX9 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Cfap99A0A140LIX9 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cfap99A0A140LIX9 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cfap99A0A140LIX9 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Cfap99A0A140LIX9 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Cfap99A0A140LIX9 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cfap99A0A140LIX9 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cfap99A0A140LIX9 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cfap99A0A140LIX9 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cfap99A0A140LIX9 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cfap99A0A140LIX9 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cfap99A0A140LIX9 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cfap99A0A140LIX9 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.47■□□□□ 0.39
Cfap99A0A140LIX9 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cfap99A0A140LIX9 Gm13223-201ENSMUST00000118609 747 ntBASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms