Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9d-1A0A075B699 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9d-1A0A075B699 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9d-1A0A075B699 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9d-1A0A075B699 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9d-1A0A075B699 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9d-1A0A075B699 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9d-1A0A075B699 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.32□□□□□ -0.6
Trav9d-1A0A075B699 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9d-1A0A075B699 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trav9d-1A0A075B699 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trav9d-1A0A075B699 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
Trav9d-1A0A075B699 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trav9d-1A0A075B699 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9d-1A0A075B699 Best4-ps-201ENSMUST00000129783 1380 ntBASIC11.31□□□□□ -0.6
Trav9d-1A0A075B699 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9d-1A0A075B699 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC11.31□□□□□ -0.6
Trav9d-1A0A075B699 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav9d-1A0A075B699 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9d-1A0A075B699 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9d-1A0A075B699 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9d-1A0A075B699 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9d-1A0A075B699 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Trav9d-1A0A075B699 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9d-1A0A075B699 Gm43205-201ENSMUST00000198622 1968 ntBASIC11.31□□□□□ -0.6
Trav9d-1A0A075B699 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9d-1A0A075B699 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC11.31□□□□□ -0.6
Trav9d-1A0A075B699 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC11.31□□□□□ -0.6
Trav9d-1A0A075B699 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9d-1A0A075B699 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9d-1A0A075B699 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9d-1A0A075B699 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Trav9d-1A0A075B699 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC11.31□□□□□ -0.6
Trav9d-1A0A075B699 Umpk-ps-201ENSMUST00000211897 827 ntBASIC11.31□□□□□ -0.6
Trav9d-1A0A075B699 Gm18246-201ENSMUST00000221023 728 ntBASIC11.31□□□□□ -0.6
Trav9d-1A0A075B699 AC130671.1-201ENSMUST00000227384 1237 ntBASIC11.31□□□□□ -0.6
Trav9d-1A0A075B699 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9d-1A0A075B699 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Trav9d-1A0A075B699 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC11.31□□□□□ -0.6
Trav9d-1A0A075B699 Gm10819-201ENSMUST00000099988 561 ntBASIC11.31□□□□□ -0.6
Trav9d-1A0A075B699 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9d-1A0A075B699 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9d-1A0A075B699 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav9d-1A0A075B699 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9d-1A0A075B699 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9d-1A0A075B699 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9d-1A0A075B699 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Trav9d-1A0A075B699 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9d-1A0A075B699 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9d-1A0A075B699 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9d-1A0A075B699 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9d-1A0A075B699 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9d-1A0A075B699 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav9d-1A0A075B699 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9d-1A0A075B699 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9d-1A0A075B699 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9d-1A0A075B699 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.3□□□□□ -0.6
Trav9d-1A0A075B699 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trav9d-1A0A075B699 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Trav9d-1A0A075B699 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9d-1A0A075B699 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9d-1A0A075B699 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trav9d-1A0A075B699 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9d-1A0A075B699 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9d-1A0A075B699 Gm12008-201ENSMUST00000117791 755 ntBASIC11.3□□□□□ -0.6
Trav9d-1A0A075B699 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC11.3□□□□□ -0.6
Trav9d-1A0A075B699 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav9d-1A0A075B699 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trav9d-1A0A075B699 Gm43935-201ENSMUST00000203569 1050 ntBASIC11.3□□□□□ -0.6
Trav9d-1A0A075B699 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9d-1A0A075B699 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC11.3□□□□□ -0.6
Trav9d-1A0A075B699 CT010506.4-201ENSMUST00000225457 351 ntBASIC11.3□□□□□ -0.6
Trav9d-1A0A075B699 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9d-1A0A075B699 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9d-1A0A075B699 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9d-1A0A075B699 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Trav9d-1A0A075B699 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9d-1A0A075B699 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9d-1A0A075B699 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9d-1A0A075B699 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9d-1A0A075B699 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav9d-1A0A075B699 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9d-1A0A075B699 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9d-1A0A075B699 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9d-1A0A075B699 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9d-1A0A075B699 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9d-1A0A075B699 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Trav9d-1A0A075B699 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9d-1A0A075B699 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9d-1A0A075B699 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9d-1A0A075B699 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav9d-1A0A075B699 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9d-1A0A075B699 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trav9d-1A0A075B699 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9d-1A0A075B699 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9d-1A0A075B699 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9d-1A0A075B699 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9d-1A0A075B699 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9d-1A0A075B699 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9d-1A0A075B699 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms