Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Gm12001-201ENSMUST00000121727 913 ntBASIC15.15■□□□□ 0.02
Msh5Q9QUM7 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.15■□□□□ 0.02
Msh5Q9QUM7 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Msh5Q9QUM7 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Msh5Q9QUM7 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
Msh5Q9QUM7 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Msh5Q9QUM7 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.15■□□□□ 0.02
Msh5Q9QUM7 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
Msh5Q9QUM7 Gm6681-201ENSMUST00000205215 607 ntBASIC15.15■□□□□ 0.02
Msh5Q9QUM7 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.15■□□□□ 0.02
Msh5Q9QUM7 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Msh5Q9QUM7 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.15■□□□□ 0.02
Msh5Q9QUM7 Mzt1-203ENSMUST00000227948 952 ntBASIC15.15■□□□□ 0.02
Msh5Q9QUM7 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.15■□□□□ 0.02
Msh5Q9QUM7 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Msh5Q9QUM7 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Msh5Q9QUM7 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Msh5Q9QUM7 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Msh5Q9QUM7 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Msh5Q9QUM7 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Msh5Q9QUM7 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Msh5Q9QUM7 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Msh5Q9QUM7 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Msh5Q9QUM7 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Msh5Q9QUM7 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Msh5Q9QUM7 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Msh5Q9QUM7 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Msh5Q9QUM7 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Msh5Q9QUM7 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Msh5Q9QUM7 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.14■□□□□ 0.01
Msh5Q9QUM7 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Msh5Q9QUM7 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.14■□□□□ 0.01
Msh5Q9QUM7 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Msh5Q9QUM7 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Msh5Q9QUM7 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Msh5Q9QUM7 Gm24590-201ENSMUST00000116699 119 ntBASIC15.14■□□□□ 0.01
Msh5Q9QUM7 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC15.14■□□□□ 0.01
Msh5Q9QUM7 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC15.14■□□□□ 0.01
Msh5Q9QUM7 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.14■□□□□ 0.01
Msh5Q9QUM7 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Msh5Q9QUM7 Gm44251-201ENSMUST00000204963 442 ntBASIC15.14■□□□□ 0.01
Msh5Q9QUM7 Gm44552-201ENSMUST00000205458 1247 ntBASIC15.14■□□□□ 0.01
Msh5Q9QUM7 Gm18195-201ENSMUST00000207604 706 ntBASIC15.14■□□□□ 0.01
Msh5Q9QUM7 Gm45072-201ENSMUST00000208673 929 ntBASIC15.14■□□□□ 0.01
Msh5Q9QUM7 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Msh5Q9QUM7 AC132446.1-201ENSMUST00000222655 226 ntBASIC15.14■□□□□ 0.01
Msh5Q9QUM7 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Msh5Q9QUM7 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Msh5Q9QUM7 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Msh5Q9QUM7 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Msh5Q9QUM7 Speer4c-201ENSMUST00000095005 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Msh5Q9QUM7 Speer4d-201ENSMUST00000095006 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Msh5Q9QUM7 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Msh5Q9QUM7 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Msh5Q9QUM7 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Msh5Q9QUM7 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Msh5Q9QUM7 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Msh5Q9QUM7 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Msh5Q9QUM7 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Msh5Q9QUM7 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Msh5Q9QUM7 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Msh5Q9QUM7 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.14■□□□□ 0.01
Msh5Q9QUM7 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Msh5Q9QUM7 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msh5Q9QUM7 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Msh5Q9QUM7 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msh5Q9QUM7 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msh5Q9QUM7 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Msh5Q9QUM7 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msh5Q9QUM7 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msh5Q9QUM7 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msh5Q9QUM7 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msh5Q9QUM7 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Msh5Q9QUM7 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msh5Q9QUM7 Gm7222-201ENSMUST00000117512 906 ntBASIC15.13■□□□□ 0.01
Msh5Q9QUM7 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msh5Q9QUM7 Celrr-201ENSMUST00000181183 1194 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Msh5Q9QUM7 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Msh5Q9QUM7 Gm6550-201ENSMUST00000187574 993 ntBASIC15.13■□□□□ 0.01
Msh5Q9QUM7 Ighv10-4-201ENSMUST00000193702 299 ntBASIC15.13■□□□□ 0.01
Msh5Q9QUM7 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.13■□□□□ 0.01
Msh5Q9QUM7 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.13■□□□□ 0.01
Msh5Q9QUM7 AC153529.1-201ENSMUST00000217818 370 ntBASIC15.13■□□□□ 0.01
Msh5Q9QUM7 AC132433.1-201ENSMUST00000221553 1101 ntBASIC15.13■□□□□ 0.01
Msh5Q9QUM7 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msh5Q9QUM7 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msh5Q9QUM7 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Msh5Q9QUM7 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msh5Q9QUM7 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msh5Q9QUM7 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Msh5Q9QUM7 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msh5Q9QUM7 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msh5Q9QUM7 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Msh5Q9QUM7 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msh5Q9QUM7 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msh5Q9QUM7 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Msh5Q9QUM7 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.12■□□□□ 0.01
Msh5Q9QUM7 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Msh5Q9QUM7 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Msh5Q9QUM7 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms