Protein–RNA interactions for Protein: Q99MS8

Tpgs1, Tubulin polyglutamylase complex subunit 1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpgs1Q99MS8 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.26■□□□□ 0.03
Tpgs1Q99MS8 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tpgs1Q99MS8 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tpgs1Q99MS8 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Tpgs1Q99MS8 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tpgs1Q99MS8 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tpgs1Q99MS8 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Tpgs1Q99MS8 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Tpgs1Q99MS8 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tpgs1Q99MS8 Gm24158-201ENSMUST00000175263 71 ntBASIC15.26■□□□□ 0.03
Tpgs1Q99MS8 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC15.26■□□□□ 0.03
Tpgs1Q99MS8 Gm5867-201ENSMUST00000063197 592 ntBASIC15.26■□□□□ 0.03
Tpgs1Q99MS8 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15.26■□□□□ 0.03
Tpgs1Q99MS8 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Tpgs1Q99MS8 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Tpgs1Q99MS8 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tpgs1Q99MS8 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tpgs1Q99MS8 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tpgs1Q99MS8 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tpgs1Q99MS8 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tpgs1Q99MS8 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tpgs1Q99MS8 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tpgs1Q99MS8 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tpgs1Q99MS8 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tpgs1Q99MS8 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tpgs1Q99MS8 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC15.26■□□□□ 0.03
Tpgs1Q99MS8 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Tpgs1Q99MS8 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tpgs1Q99MS8 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Tpgs1Q99MS8 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Tpgs1Q99MS8 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tpgs1Q99MS8 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tpgs1Q99MS8 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tpgs1Q99MS8 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tpgs1Q99MS8 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Tpgs1Q99MS8 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Tpgs1Q99MS8 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tpgs1Q99MS8 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tpgs1Q99MS8 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.25■□□□□ 0.03
Tpgs1Q99MS8 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tpgs1Q99MS8 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tpgs1Q99MS8 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tpgs1Q99MS8 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tpgs1Q99MS8 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tpgs1Q99MS8 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tpgs1Q99MS8 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Tpgs1Q99MS8 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tpgs1Q99MS8 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tpgs1Q99MS8 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tpgs1Q99MS8 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tpgs1Q99MS8 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tpgs1Q99MS8 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Tpgs1Q99MS8 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tpgs1Q99MS8 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tpgs1Q99MS8 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC15.24■□□□□ 0.03
Tpgs1Q99MS8 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tpgs1Q99MS8 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tpgs1Q99MS8 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tpgs1Q99MS8 Mir449b-201ENSMUST00000104833 80 ntBASIC15.24■□□□□ 0.03
Tpgs1Q99MS8 Gm14701-201ENSMUST00000117156 348 ntBASIC15.24■□□□□ 0.03
Tpgs1Q99MS8 Gm15693-201ENSMUST00000120470 637 ntBASIC15.24■□□□□ 0.03
Tpgs1Q99MS8 Gm12134-201ENSMUST00000122109 520 ntBASIC15.24■□□□□ 0.03
Tpgs1Q99MS8 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tpgs1Q99MS8 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC15.24■□□□□ 0.03
Tpgs1Q99MS8 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC15.24■□□□□ 0.03
Tpgs1Q99MS8 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tpgs1Q99MS8 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tpgs1Q99MS8 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tpgs1Q99MS8 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tpgs1Q99MS8 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.24■□□□□ 0.03
Tpgs1Q99MS8 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tpgs1Q99MS8 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tpgs1Q99MS8 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tpgs1Q99MS8 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.23■□□□□ 0.03
Tpgs1Q99MS8 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tpgs1Q99MS8 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tpgs1Q99MS8 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tpgs1Q99MS8 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tpgs1Q99MS8 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tpgs1Q99MS8 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tpgs1Q99MS8 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tpgs1Q99MS8 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Tpgs1Q99MS8 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tpgs1Q99MS8 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Tpgs1Q99MS8 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tpgs1Q99MS8 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tpgs1Q99MS8 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Tpgs1Q99MS8 Gm29310-201ENSMUST00000185468 696 ntBASIC15.23■□□□□ 0.03
Tpgs1Q99MS8 Gm21825-201ENSMUST00000185728 696 ntBASIC15.23■□□□□ 0.03
Tpgs1Q99MS8 Gm29109-201ENSMUST00000185895 696 ntBASIC15.23■□□□□ 0.03
Tpgs1Q99MS8 Gm21896-201ENSMUST00000186520 696 ntBASIC15.23■□□□□ 0.03
Tpgs1Q99MS8 Gm21873-201ENSMUST00000186728 696 ntBASIC15.23■□□□□ 0.03
Tpgs1Q99MS8 Gm21794-201ENSMUST00000187056 696 ntBASIC15.23■□□□□ 0.03
Tpgs1Q99MS8 Gm21880-201ENSMUST00000187275 696 ntBASIC15.23■□□□□ 0.03
Tpgs1Q99MS8 Gm21826-201ENSMUST00000187451 696 ntBASIC15.23■□□□□ 0.03
Tpgs1Q99MS8 Gm21198-201ENSMUST00000188393 696 ntBASIC15.23■□□□□ 0.03
Tpgs1Q99MS8 Gm21749-201ENSMUST00000189343 696 ntBASIC15.23■□□□□ 0.03
Tpgs1Q99MS8 Gm21901-201ENSMUST00000189568 696 ntBASIC15.23■□□□□ 0.03
Tpgs1Q99MS8 Gm29424-201ENSMUST00000189716 696 ntBASIC15.23■□□□□ 0.03
Tpgs1Q99MS8 Gm28599-201ENSMUST00000189838 694 ntBASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms