Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb2Q91Y00 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb2Q91Y00 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb2Q91Y00 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb2Q91Y00 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Pcdhb2Q91Y00 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb2Q91Y00 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.57■□□□□ 0.08
Pcdhb2Q91Y00 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.57■□□□□ 0.08
Pcdhb2Q91Y00 Gm43474-201ENSMUST00000196415 774 ntBASIC15.57■□□□□ 0.08
Pcdhb2Q91Y00 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.57■□□□□ 0.08
Pcdhb2Q91Y00 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.57■□□□□ 0.08
Pcdhb2Q91Y00 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb2Q91Y00 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb2Q91Y00 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb2Q91Y00 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Pcdhb2Q91Y00 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Pcdhb2Q91Y00 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb2Q91Y00 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb2Q91Y00 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb2Q91Y00 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb2Q91Y00 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Pcdhb2Q91Y00 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb2Q91Y00 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb2Q91Y00 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb2Q91Y00 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb2Q91Y00 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb2Q91Y00 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb2Q91Y00 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb2Q91Y00 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb2Q91Y00 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Pcdhb2Q91Y00 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.56■□□□□ 0.08
Pcdhb2Q91Y00 Gm2810-201ENSMUST00000118681 990 ntBASIC15.56■□□□□ 0.08
Pcdhb2Q91Y00 Gm13464-201ENSMUST00000119418 935 ntBASIC15.56■□□□□ 0.08
Pcdhb2Q91Y00 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.56■□□□□ 0.08
Pcdhb2Q91Y00 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.56■□□□□ 0.08
Pcdhb2Q91Y00 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.56■□□□□ 0.08
Pcdhb2Q91Y00 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC15.56■□□□□ 0.08
Pcdhb2Q91Y00 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb2Q91Y00 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb2Q91Y00 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.56■□□□□ 0.08
Pcdhb2Q91Y00 AC154532.1-201ENSMUST00000227860 965 ntBASIC15.56■□□□□ 0.08
Pcdhb2Q91Y00 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb2Q91Y00 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Pcdhb2Q91Y00 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb2Q91Y00 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb2Q91Y00 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb2Q91Y00 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb2Q91Y00 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb2Q91Y00 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Pcdhb2Q91Y00 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb2Q91Y00 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb2Q91Y00 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb2Q91Y00 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb2Q91Y00 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Pcdhb2Q91Y00 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Pcdhb2Q91Y00 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb2Q91Y00 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC15.55■□□□□ 0.08
Pcdhb2Q91Y00 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb2Q91Y00 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb2Q91Y00 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb2Q91Y00 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Pcdhb2Q91Y00 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Pcdhb2Q91Y00 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb2Q91Y00 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb2Q91Y00 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb2Q91Y00 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.55■□□□□ 0.08
Pcdhb2Q91Y00 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb2Q91Y00 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb2Q91Y00 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Pcdhb2Q91Y00 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.55■□□□□ 0.08
Pcdhb2Q91Y00 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Pcdhb2Q91Y00 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC15.55■□□□□ 0.08
Pcdhb2Q91Y00 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Pcdhb2Q91Y00 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Pcdhb2Q91Y00 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.55■□□□□ 0.08
Pcdhb2Q91Y00 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb2Q91Y00 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC15.55■□□□□ 0.08
Pcdhb2Q91Y00 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Pcdhb2Q91Y00 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb2Q91Y00 Gm24158-201ENSMUST00000175263 71 ntBASIC15.55■□□□□ 0.08
Pcdhb2Q91Y00 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC15.55■□□□□ 0.08
Pcdhb2Q91Y00 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.55■□□□□ 0.08
Pcdhb2Q91Y00 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.55■□□□□ 0.08
Pcdhb2Q91Y00 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb2Q91Y00 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb2Q91Y00 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.55■□□□□ 0.08
Pcdhb2Q91Y00 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb2Q91Y00 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb2Q91Y00 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb2Q91Y00 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb2Q91Y00 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb2Q91Y00 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb2Q91Y00 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb2Q91Y00 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb2Q91Y00 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb2Q91Y00 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb2Q91Y00 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb2Q91Y00 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb2Q91Y00 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb2Q91Y00 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms