Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TraipQ8VIG6 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC15.58■□□□□ 0.08
TraipQ8VIG6 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TraipQ8VIG6 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TraipQ8VIG6 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TraipQ8VIG6 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
TraipQ8VIG6 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TraipQ8VIG6 Gm3436-201ENSMUST00000179930 840 ntBASIC15.58■□□□□ 0.08
TraipQ8VIG6 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC15.58■□□□□ 0.08
TraipQ8VIG6 Wdyhv1-206ENSMUST00000227142 786 ntBASIC15.58■□□□□ 0.08
TraipQ8VIG6 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TraipQ8VIG6 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TraipQ8VIG6 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
TraipQ8VIG6 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TraipQ8VIG6 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
TraipQ8VIG6 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TraipQ8VIG6 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TraipQ8VIG6 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
TraipQ8VIG6 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TraipQ8VIG6 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TraipQ8VIG6 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
TraipQ8VIG6 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TraipQ8VIG6 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TraipQ8VIG6 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TraipQ8VIG6 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TraipQ8VIG6 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TraipQ8VIG6 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TraipQ8VIG6 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TraipQ8VIG6 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TraipQ8VIG6 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.57■□□□□ 0.08
TraipQ8VIG6 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TraipQ8VIG6 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC15.57■□□□□ 0.08
TraipQ8VIG6 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC15.57■□□□□ 0.08
TraipQ8VIG6 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
TraipQ8VIG6 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TraipQ8VIG6 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TraipQ8VIG6 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15.57■□□□□ 0.08
TraipQ8VIG6 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TraipQ8VIG6 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TraipQ8VIG6 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TraipQ8VIG6 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TraipQ8VIG6 BC001981-202ENSMUST00000191393 1545 ntBASIC15.57■□□□□ 0.08
TraipQ8VIG6 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TraipQ8VIG6 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TraipQ8VIG6 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TraipQ8VIG6 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TraipQ8VIG6 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TraipQ8VIG6 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TraipQ8VIG6 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TraipQ8VIG6 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TraipQ8VIG6 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TraipQ8VIG6 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TraipQ8VIG6 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TraipQ8VIG6 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TraipQ8VIG6 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TraipQ8VIG6 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.56■□□□□ 0.08
TraipQ8VIG6 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TraipQ8VIG6 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TraipQ8VIG6 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TraipQ8VIG6 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC15.56■□□□□ 0.08
TraipQ8VIG6 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TraipQ8VIG6 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TraipQ8VIG6 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TraipQ8VIG6 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TraipQ8VIG6 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TraipQ8VIG6 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TraipQ8VIG6 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TraipQ8VIG6 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TraipQ8VIG6 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TraipQ8VIG6 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TraipQ8VIG6 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TraipQ8VIG6 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TraipQ8VIG6 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
TraipQ8VIG6 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TraipQ8VIG6 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TraipQ8VIG6 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TraipQ8VIG6 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TraipQ8VIG6 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TraipQ8VIG6 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TraipQ8VIG6 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TraipQ8VIG6 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TraipQ8VIG6 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TraipQ8VIG6 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TraipQ8VIG6 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TraipQ8VIG6 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TraipQ8VIG6 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TraipQ8VIG6 Gm15487-201ENSMUST00000122373 465 ntBASIC15.55■□□□□ 0.08
TraipQ8VIG6 Mir1897-201ENSMUST00000122581 272 ntBASIC15.55■□□□□ 0.08
TraipQ8VIG6 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TraipQ8VIG6 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TraipQ8VIG6 Gm5866-201ENSMUST00000177881 973 ntBASIC15.55■□□□□ 0.08
TraipQ8VIG6 Gm24694-201ENSMUST00000180054 110 ntBASIC15.55■□□□□ 0.08
TraipQ8VIG6 Gm27663-201ENSMUST00000184839 110 ntBASIC15.55■□□□□ 0.08
TraipQ8VIG6 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TraipQ8VIG6 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TraipQ8VIG6 Gm5626-201ENSMUST00000222151 1058 ntBASIC15.55■□□□□ 0.08
TraipQ8VIG6 CT025535.1-201ENSMUST00000227172 491 ntBASIC15.55■□□□□ 0.08
TraipQ8VIG6 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TraipQ8VIG6 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TraipQ8VIG6 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms