Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Vps4aQ8VEJ9 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps4aQ8VEJ9 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vps4aQ8VEJ9 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Vps4aQ8VEJ9 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vps4aQ8VEJ9 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps4aQ8VEJ9 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps4aQ8VEJ9 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps4aQ8VEJ9 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vps4aQ8VEJ9 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4aQ8VEJ9 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4aQ8VEJ9 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Vps4aQ8VEJ9 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4aQ8VEJ9 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4aQ8VEJ9 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4aQ8VEJ9 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4aQ8VEJ9 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4aQ8VEJ9 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4aQ8VEJ9 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4aQ8VEJ9 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4aQ8VEJ9 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Vps4aQ8VEJ9 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4aQ8VEJ9 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Vps4aQ8VEJ9 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4aQ8VEJ9 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4aQ8VEJ9 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.25□□□□□ -0.13
Vps4aQ8VEJ9 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4aQ8VEJ9 Gm10499-201ENSMUST00000174094 934 ntBASIC14.25□□□□□ -0.13
Vps4aQ8VEJ9 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.25□□□□□ -0.13
Vps4aQ8VEJ9 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4aQ8VEJ9 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4aQ8VEJ9 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4aQ8VEJ9 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4aQ8VEJ9 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4aQ8VEJ9 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4aQ8VEJ9 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4aQ8VEJ9 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4aQ8VEJ9 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4aQ8VEJ9 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4aQ8VEJ9 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4aQ8VEJ9 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4aQ8VEJ9 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4aQ8VEJ9 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Vps4aQ8VEJ9 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vps4aQ8VEJ9 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Vps4aQ8VEJ9 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vps4aQ8VEJ9 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps4aQ8VEJ9 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps4aQ8VEJ9 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vps4aQ8VEJ9 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Vps4aQ8VEJ9 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.24□□□□□ -0.13
Vps4aQ8VEJ9 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
Vps4aQ8VEJ9 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.24□□□□□ -0.13
Vps4aQ8VEJ9 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps4aQ8VEJ9 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps4aQ8VEJ9 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Vps4aQ8VEJ9 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.24□□□□□ -0.13
Vps4aQ8VEJ9 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.24□□□□□ -0.13
Vps4aQ8VEJ9 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.24□□□□□ -0.13
Vps4aQ8VEJ9 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.24□□□□□ -0.13
Vps4aQ8VEJ9 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps4aQ8VEJ9 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps4aQ8VEJ9 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps4aQ8VEJ9 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps4aQ8VEJ9 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Vps4aQ8VEJ9 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.24□□□□□ -0.13
Vps4aQ8VEJ9 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps4aQ8VEJ9 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps4aQ8VEJ9 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps4aQ8VEJ9 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Vps4aQ8VEJ9 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.24□□□□□ -0.13
Vps4aQ8VEJ9 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps4aQ8VEJ9 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Vps4aQ8VEJ9 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vps4aQ8VEJ9 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.24□□□□□ -0.13
Vps4aQ8VEJ9 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Vps4aQ8VEJ9 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.24□□□□□ -0.13
Vps4aQ8VEJ9 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps4aQ8VEJ9 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps4aQ8VEJ9 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vps4aQ8VEJ9 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps4aQ8VEJ9 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps4aQ8VEJ9 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps4aQ8VEJ9 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vps4aQ8VEJ9 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.23□□□□□ -0.13
Vps4aQ8VEJ9 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps4aQ8VEJ9 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Vps4aQ8VEJ9 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Vps4aQ8VEJ9 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps4aQ8VEJ9 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps4aQ8VEJ9 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.23□□□□□ -0.13
Vps4aQ8VEJ9 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps4aQ8VEJ9 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.23□□□□□ -0.13
Vps4aQ8VEJ9 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps4aQ8VEJ9 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Vps4aQ8VEJ9 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vps4aQ8VEJ9 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vps4aQ8VEJ9 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Vps4aQ8VEJ9 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.23□□□□□ -0.13
Vps4aQ8VEJ9 Mir6956-201ENSMUST00000183598 62 ntBASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms