Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Q8VDP2 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Q8VDP2 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Q8VDP2 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Q8VDP2 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Q8VDP2 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Q8VDP2 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Q8VDP2 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Q8VDP2 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.36□□□□□ -0.11
Q8VDP2 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Q8VDP2 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.36□□□□□ -0.11
Q8VDP2 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Q8VDP2 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Q8VDP2 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Q8VDP2 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.36□□□□□ -0.11
Q8VDP2 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Q8VDP2 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Q8VDP2 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Q8VDP2 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Q8VDP2 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Q8VDP2 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Q8VDP2 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Q8VDP2 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Q8VDP2 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Q8VDP2 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Q8VDP2 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Q8VDP2 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Q8VDP2 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Q8VDP2 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Q8VDP2 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Q8VDP2 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Q8VDP2 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Q8VDP2 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Q8VDP2 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Q8VDP2 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Q8VDP2 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Q8VDP2 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Q8VDP2 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.35□□□□□ -0.11
Q8VDP2 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Q8VDP2 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Q8VDP2 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Q8VDP2 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Q8VDP2 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Q8VDP2 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.35□□□□□ -0.11
Q8VDP2 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Q8VDP2 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Q8VDP2 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Q8VDP2 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Q8VDP2 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Q8VDP2 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Q8VDP2 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Q8VDP2 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Q8VDP2 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Q8VDP2 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Q8VDP2 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Q8VDP2 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Q8VDP2 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Q8VDP2 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Q8VDP2 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Q8VDP2 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Q8VDP2 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Q8VDP2 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Q8VDP2 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Q8VDP2 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Q8VDP2 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Q8VDP2 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Q8VDP2 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Q8VDP2 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Q8VDP2 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Q8VDP2 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Q8VDP2 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Q8VDP2 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Q8VDP2 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Q8VDP2 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Q8VDP2 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Q8VDP2 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Q8VDP2 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Q8VDP2 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Q8VDP2 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Q8VDP2 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Q8VDP2 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Q8VDP2 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Q8VDP2 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Q8VDP2 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Q8VDP2 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Q8VDP2 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Q8VDP2 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Q8VDP2 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Q8VDP2 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.33□□□□□ -0.11
Q8VDP2 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Q8VDP2 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Q8VDP2 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Q8VDP2 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Q8VDP2 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Q8VDP2 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.33□□□□□ -0.12
Q8VDP2 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Q8VDP2 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.33□□□□□ -0.12
Q8VDP2 Gm3375-201ENSMUST00000203929 796 ntBASIC14.33□□□□□ -0.12
Q8VDP2 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Q8VDP2 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms