Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf8Q8VC56 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf8Q8VC56 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf8Q8VC56 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf8Q8VC56 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf8Q8VC56 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Rnf8Q8VC56 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf8Q8VC56 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf8Q8VC56 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.17□□□□□ -0.14
Rnf8Q8VC56 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf8Q8VC56 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Rnf8Q8VC56 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.17□□□□□ -0.14
Rnf8Q8VC56 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.17□□□□□ -0.14
Rnf8Q8VC56 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Rnf8Q8VC56 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf8Q8VC56 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf8Q8VC56 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf8Q8VC56 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf8Q8VC56 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf8Q8VC56 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Rnf8Q8VC56 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf8Q8VC56 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf8Q8VC56 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf8Q8VC56 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf8Q8VC56 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.17□□□□□ -0.14
Rnf8Q8VC56 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.17□□□□□ -0.14
Rnf8Q8VC56 Gm5682-201ENSMUST00000173402 505 ntBASIC14.17□□□□□ -0.14
Rnf8Q8VC56 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf8Q8VC56 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf8Q8VC56 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.17□□□□□ -0.14
Rnf8Q8VC56 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.17□□□□□ -0.14
Rnf8Q8VC56 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf8Q8VC56 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf8Q8VC56 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf8Q8VC56 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf8Q8VC56 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Rnf8Q8VC56 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf8Q8VC56 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf8Q8VC56 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf8Q8VC56 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf8Q8VC56 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf8Q8VC56 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Rnf8Q8VC56 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf8Q8VC56 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.16□□□□□ -0.14
Rnf8Q8VC56 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.16□□□□□ -0.14
Rnf8Q8VC56 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf8Q8VC56 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.16□□□□□ -0.14
Rnf8Q8VC56 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.16□□□□□ -0.14
Rnf8Q8VC56 Gm18206-201ENSMUST00000207027 926 ntBASIC14.16□□□□□ -0.14
Rnf8Q8VC56 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf8Q8VC56 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.16□□□□□ -0.14
Rnf8Q8VC56 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Rnf8Q8VC56 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf8Q8VC56 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf8Q8VC56 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf8Q8VC56 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf8Q8VC56 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf8Q8VC56 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf8Q8VC56 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf8Q8VC56 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.16□□□□□ -0.14
Rnf8Q8VC56 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf8Q8VC56 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf8Q8VC56 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Rnf8Q8VC56 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf8Q8VC56 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf8Q8VC56 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf8Q8VC56 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf8Q8VC56 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf8Q8VC56 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf8Q8VC56 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf8Q8VC56 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf8Q8VC56 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf8Q8VC56 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf8Q8VC56 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf8Q8VC56 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rnf8Q8VC56 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf8Q8VC56 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf8Q8VC56 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf8Q8VC56 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf8Q8VC56 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf8Q8VC56 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf8Q8VC56 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf8Q8VC56 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf8Q8VC56 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf8Q8VC56 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.15□□□□□ -0.14
Rnf8Q8VC56 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.15□□□□□ -0.14
Rnf8Q8VC56 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf8Q8VC56 Gm8318-201ENSMUST00000182954 872 ntBASIC14.15□□□□□ -0.14
Rnf8Q8VC56 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.15□□□□□ -0.14
Rnf8Q8VC56 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.15□□□□□ -0.14
Rnf8Q8VC56 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf8Q8VC56 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf8Q8VC56 Gm15590-201ENSMUST00000078419 552 ntBASIC14.15□□□□□ -0.14
Rnf8Q8VC56 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf8Q8VC56 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf8Q8VC56 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf8Q8VC56 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
Rnf8Q8VC56 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rnf8Q8VC56 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf8Q8VC56 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms