Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Col23a1Q8K4G2 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
Col23a1Q8K4G2 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col23a1Q8K4G2 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col23a1Q8K4G2 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col23a1Q8K4G2 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col23a1Q8K4G2 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col23a1Q8K4G2 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC17.59■□□□□ 0.41
Col23a1Q8K4G2 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC17.59■□□□□ 0.41
Col23a1Q8K4G2 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
Col23a1Q8K4G2 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col23a1Q8K4G2 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col23a1Q8K4G2 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col23a1Q8K4G2 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col23a1Q8K4G2 Gm13612-201ENSMUST00000119276 390 ntBASIC17.59■□□□□ 0.41
Col23a1Q8K4G2 Gm16570-201ENSMUST00000161951 436 ntBASIC17.59■□□□□ 0.41
Col23a1Q8K4G2 Gm27516-201ENSMUST00000184237 98 ntBASIC17.59■□□□□ 0.41
Col23a1Q8K4G2 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col23a1Q8K4G2 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC17.59■□□□□ 0.41
Col23a1Q8K4G2 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col23a1Q8K4G2 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col23a1Q8K4G2 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col23a1Q8K4G2 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col23a1Q8K4G2 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col23a1Q8K4G2 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col23a1Q8K4G2 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Col23a1Q8K4G2 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col23a1Q8K4G2 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col23a1Q8K4G2 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.58■□□□□ 0.41
Col23a1Q8K4G2 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Col23a1Q8K4G2 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col23a1Q8K4G2 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col23a1Q8K4G2 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col23a1Q8K4G2 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
Col23a1Q8K4G2 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Col23a1Q8K4G2 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC17.58■□□□□ 0.4
Col23a1Q8K4G2 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC17.58■□□□□ 0.4
Col23a1Q8K4G2 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col23a1Q8K4G2 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC17.58■□□□□ 0.4
Col23a1Q8K4G2 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col23a1Q8K4G2 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col23a1Q8K4G2 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col23a1Q8K4G2 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Col23a1Q8K4G2 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col23a1Q8K4G2 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col23a1Q8K4G2 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Col23a1Q8K4G2 App-207ENSMUST00000227737 2827 ntBASIC17.57■□□□□ 0.4
Col23a1Q8K4G2 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col23a1Q8K4G2 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col23a1Q8K4G2 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Col23a1Q8K4G2 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col23a1Q8K4G2 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC17.57■□□□□ 0.4
Col23a1Q8K4G2 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Col23a1Q8K4G2 Gm15957-201ENSMUST00000118893 974 ntBASIC17.57■□□□□ 0.4
Col23a1Q8K4G2 Gm12416-201ENSMUST00000120911 1008 ntBASIC17.57■□□□□ 0.4
Col23a1Q8K4G2 Gm12882-201ENSMUST00000121696 517 ntBASIC17.57■□□□□ 0.4
Col23a1Q8K4G2 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC17.57■□□□□ 0.4
Col23a1Q8K4G2 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Col23a1Q8K4G2 Gm19184-201ENSMUST00000196798 928 ntBASIC17.57■□□□□ 0.4
Col23a1Q8K4G2 Gm38671-201ENSMUST00000200573 130 ntBASIC17.57■□□□□ 0.4
Col23a1Q8K4G2 Gm3961-201ENSMUST00000204425 994 ntBASIC17.57■□□□□ 0.4
Col23a1Q8K4G2 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Col23a1Q8K4G2 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Col23a1Q8K4G2 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Col23a1Q8K4G2 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col23a1Q8K4G2 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col23a1Q8K4G2 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col23a1Q8K4G2 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Col23a1Q8K4G2 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col23a1Q8K4G2 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC17.57■□□□□ 0.4
Col23a1Q8K4G2 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col23a1Q8K4G2 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col23a1Q8K4G2 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Col23a1Q8K4G2 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col23a1Q8K4G2 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col23a1Q8K4G2 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col23a1Q8K4G2 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col23a1Q8K4G2 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col23a1Q8K4G2 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Col23a1Q8K4G2 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col23a1Q8K4G2 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col23a1Q8K4G2 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC17.56■□□□□ 0.4
Col23a1Q8K4G2 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col23a1Q8K4G2 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col23a1Q8K4G2 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col23a1Q8K4G2 Gm3786-201ENSMUST00000202659 378 ntBASIC17.56■□□□□ 0.4
Col23a1Q8K4G2 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Col23a1Q8K4G2 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col23a1Q8K4G2 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC17.56■□□□□ 0.4
Col23a1Q8K4G2 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col23a1Q8K4G2 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col23a1Q8K4G2 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Col23a1Q8K4G2 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col23a1Q8K4G2 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Col23a1Q8K4G2 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col23a1Q8K4G2 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col23a1Q8K4G2 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col23a1Q8K4G2 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Col23a1Q8K4G2 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col23a1Q8K4G2 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms