Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rab11fip3Q8CHD8 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rab11fip3Q8CHD8 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rab11fip3Q8CHD8 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rab11fip3Q8CHD8 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC18.93■□□□□ 0.62
Rab11fip3Q8CHD8 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rab11fip3Q8CHD8 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rab11fip3Q8CHD8 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rab11fip3Q8CHD8 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rab11fip3Q8CHD8 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC18.93■□□□□ 0.62
Rab11fip3Q8CHD8 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rab11fip3Q8CHD8 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC18.93■□□□□ 0.62
Rab11fip3Q8CHD8 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rab11fip3Q8CHD8 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rab11fip3Q8CHD8 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rab11fip3Q8CHD8 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rab11fip3Q8CHD8 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rab11fip3Q8CHD8 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Rab11fip3Q8CHD8 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rab11fip3Q8CHD8 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rab11fip3Q8CHD8 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
Rab11fip3Q8CHD8 Gm14780-201ENSMUST00000118387 2737 ntBASIC18.93■□□□□ 0.62
Rab11fip3Q8CHD8 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rab11fip3Q8CHD8 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rab11fip3Q8CHD8 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rab11fip3Q8CHD8 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rab11fip3Q8CHD8 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rab11fip3Q8CHD8 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rab11fip3Q8CHD8 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC18.92■□□□□ 0.62
Rab11fip3Q8CHD8 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC18.92■□□□□ 0.62
Rab11fip3Q8CHD8 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rab11fip3Q8CHD8 Gm27838-201ENSMUST00000184829 128 ntBASIC18.92■□□□□ 0.62
Rab11fip3Q8CHD8 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC18.92■□□□□ 0.62
Rab11fip3Q8CHD8 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC18.92■□□□□ 0.62
Rab11fip3Q8CHD8 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC18.92■□□□□ 0.62
Rab11fip3Q8CHD8 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Rab11fip3Q8CHD8 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rab11fip3Q8CHD8 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rab11fip3Q8CHD8 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rab11fip3Q8CHD8 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rab11fip3Q8CHD8 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rab11fip3Q8CHD8 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Rab11fip3Q8CHD8 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Rab11fip3Q8CHD8 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rab11fip3Q8CHD8 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rab11fip3Q8CHD8 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rab11fip3Q8CHD8 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Rab11fip3Q8CHD8 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rab11fip3Q8CHD8 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Rab11fip3Q8CHD8 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rab11fip3Q8CHD8 Mir1897-201ENSMUST00000122581 272 ntBASIC18.91■□□□□ 0.62
Rab11fip3Q8CHD8 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC18.91■□□□□ 0.62
Rab11fip3Q8CHD8 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Rab11fip3Q8CHD8 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Rab11fip3Q8CHD8 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC18.91■□□□□ 0.62
Rab11fip3Q8CHD8 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC18.91■□□□□ 0.62
Rab11fip3Q8CHD8 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rab11fip3Q8CHD8 Gm5626-201ENSMUST00000222151 1058 ntBASIC18.91■□□□□ 0.62
Rab11fip3Q8CHD8 AC149588.3-201ENSMUST00000227515 150 ntBASIC18.91■□□□□ 0.62
Rab11fip3Q8CHD8 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC18.91■□□□□ 0.62
Rab11fip3Q8CHD8 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Rab11fip3Q8CHD8 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rab11fip3Q8CHD8 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rab11fip3Q8CHD8 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rab11fip3Q8CHD8 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rab11fip3Q8CHD8 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rab11fip3Q8CHD8 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC18.91■□□□□ 0.62
Rab11fip3Q8CHD8 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rab11fip3Q8CHD8 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rab11fip3Q8CHD8 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rab11fip3Q8CHD8 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Rab11fip3Q8CHD8 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab11fip3Q8CHD8 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab11fip3Q8CHD8 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab11fip3Q8CHD8 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rab11fip3Q8CHD8 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rab11fip3Q8CHD8 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab11fip3Q8CHD8 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab11fip3Q8CHD8 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Rab11fip3Q8CHD8 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab11fip3Q8CHD8 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab11fip3Q8CHD8 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rab11fip3Q8CHD8 Gm14719-201ENSMUST00000121891 340 ntBASIC18.9■□□□□ 0.62
Rab11fip3Q8CHD8 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC18.9■□□□□ 0.62
Rab11fip3Q8CHD8 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rab11fip3Q8CHD8 Gm3436-201ENSMUST00000179930 840 ntBASIC18.9■□□□□ 0.62
Rab11fip3Q8CHD8 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rab11fip3Q8CHD8 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab11fip3Q8CHD8 Wdyhv1-206ENSMUST00000227142 786 ntBASIC18.9■□□□□ 0.62
Rab11fip3Q8CHD8 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab11fip3Q8CHD8 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab11fip3Q8CHD8 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab11fip3Q8CHD8 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab11fip3Q8CHD8 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab11fip3Q8CHD8 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab11fip3Q8CHD8 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab11fip3Q8CHD8 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Rab11fip3Q8CHD8 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab11fip3Q8CHD8 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab11fip3Q8CHD8 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms